Gene Tpau_3804 details

Gene Information

• Locus tag: Tpau_3804
• ID: 9157984
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3925092
• End bp: 3925853
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 69%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003648721
• Protein GI: 296141478

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGAT TGGCGGGCAA GCGGGCGCTG GTGACGGGCG GCGCCCGCGG GCAGGGCGCC 
GCAGTGGTGC GGCGCTTCGT GGCCGAGGGA GCGCAGGTGT TGTTCGGCGA TGTGCTCGAC 
GAACAGGGGC AGGCGCTGGC CGATGAGCTC GGCGAGGCGG CGATCTACCG CCACCTGGAC 
GTGACCTCCG AGGACGACTG GGGGACCGCC GTCGCCGCGG TCCGGGAATC CTTCGGCGGC 
CTCGACGTGC TCGTCAACAA CGCCGGCGTC CTGTTCTTCT CGGCGTTGGA GCAGACCGCG 
CTGGCCGACT ACGAACGGGT GATTCGGATC AACCAGTTCG GCTGCTTCCT CGGCATGCGT 
GCCGCGGTCG AACCGATGAG GGCCGCGGGC GGTGGGTCCA TCGTGAACAC CTCGTCGGTC 
GAGGGCCTCG GCGGCATGCC CTACCTCACC GCGTACACCG CGAGTAAGTT CGCCATCCGC 
GGGATGACCA AGGCGGCGGC CATGGAGCTC GGGCAGTATG GAATCCGCGT GAATTCGGTG 
CATCCCGGGA TGATCGACAC CGCCATGGTG GCCGATGCCC TGGGCGGTAA CGAGCCGCCG 
ACGGACTGGC TCAAGCAGCG CCTACCGATC GGCCGGCAGG GCACCGCCGA CGAGATCGCC 
GCCATGGTGC TGTTCCTGGC CTCCGATGAG AGCAGCTACA GCACCGGCGC CGAATTCGTC 
GCAGACGGCG GTGCTACGGC GACGCATGCG CTGAAGCTGT AA 

 

Protein sequence

MTRLAGKRAL VTGGARGQGA AVVRRFVAEG AQVLFGDVLD EQGQALADEL GEAAIYRHLD 
VTSEDDWGTA VAAVRESFGG LDVLVNNAGV LFFSALEQTA LADYERVIRI NQFGCFLGMR 
AAVEPMRAAG GGSIVNTSSV EGLGGMPYLT AYTASKFAIR GMTKAAAMEL GQYGIRVNSV 
HPGMIDTAMV ADALGGNEPP TDWLKQRLPI GRQGTADEIA AMVLFLASDE SSYSTGAEFV 
ADGGATATHA LKL