| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1535 |
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| Symbol | |
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| ID | 6877510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1491535 |
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| End bp | 1492320 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642789398 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002219964 |
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| Protein GI | 198283643 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0579067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.028281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGCCA TCGATCTCAC CGGACGCCGT GCCCTGGTCA CCGGCGCCAG CGGCGGCCTC
GGCCAGGCCA TCGCCGAAAT CCTGGCGGCC GCCGGCGCCC AAGTCGCCGT TCATTACCGC
AAGGGGCAGG CCGAGGCCGA GCAAGTCGTC GCCGCCATCC AGGGCAAAGG CGGCAAGGCG
CAGGCATTCC AGGCCGACAT CTCCGATCCG GCCGCCGTCG AAAGATTGCT GCGGGAGATC
GACGGCGCCT TTGGCGGTCT CGACATCCTC GTCAACAACG CGGGCATGGA TGGTCCCCGC
GCCGTCGTCG GCGACGATGA CCCGCAGCTC TGGGAAAAAG TCCTCGCCGT CGATCTCGTG
GGCCCTTACT ACTGTGCCCG CGCCGCCATC CCGCGCATGG AAAAATGCGG TTGCGGCGTC
ATCATCAACA TCACCTCGGT ACACGAGTTC ATTCCCTGGG AGGGCTACAG CGCCTACACC
AGCGCCAAGG CGGGACTCTC CATGTTCACC AAGACCCTTG CCCAGGAAAC GGCCGACAAG
GGCATCCGCG TGGTCGCCAT CGCCCCCGGC GCTATCAAGA CCCCCATCAA CAAAGCCGTC
TGGGGCAACC CCGATAGCCT CAAGGATCTC GACGACAAGA TCGCCATGGA ACGCCTTGGC
ACGCCGGAGG AGATCGGCCA TGTCGCGGCC TTCCTCGCCA GCGACCTGGC CAGCTACGTT
ACCGGCACCA CCATCGCCGT CGATGGCGGC ATGCTCATCT ACCCCGATTT CCGTCATGGC
GGCTAA
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| Protein sequence | MIAIDLTGRR ALVTGASGGL GQAIAEILAA AGAQVAVHYR KGQAEAEQVV AAIQGKGGKA
QAFQADISDP AAVERLLREI DGAFGGLDIL VNNAGMDGPR AVVGDDDPQL WEKVLAVDLV
GPYYCARAAI PRMEKCGCGV IINITSVHEF IPWEGYSAYT SAKAGLSMFT KTLAQETADK
GIRVVAIAPG AIKTPINKAV WGNPDSLKDL DDKIAMERLG TPEEIGHVAA FLASDLASYV
TGTTIAVDGG MLIYPDFRHG G
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