Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1857 |
Symbol | |
ID | 7136898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1612575 |
End bp | 1613360 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643530234 |
Product | glucose 1-dehydrogenase, putative |
Protein accession | YP_002426272 |
Protein GI | 218666078 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.637675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCCA TCGATCTCAC CGGACGCCGT GCCCTGGTCA CCGGCGCCAG CGGCGGCCTC GGCCAGGCCA TCGCCGAAAT CCTGGCGGCC GCCGGCGCCC AAGTCGCCGT TCATTACCGC AAGGGGCAGG CCGAGGCCGA GCAAGTCGTC GCCGCCATCC AGGGCAAAGG CGGCAAGGCG CAGGCATTCC AGGCCGACAT CTCCGATCCG GCCGCCGTCG AAAGATTGCT GCGGGAGATC GACGGCGCCT TTGGCGGTCT CGACATCCTC GTCAACAACG CGGGCATGGA TGGTCCCCGC GCCGTCGTCG GCGACGATGA CCCGCAGCTC TGGGAAAAAG TCCTCGCCGT CGATCTCGTG GGCCCTTACT ACTGTGCCCG CGCCGCCATC CCGCGCATGG AAAAATGCGG TTGCGGCGTC ATCATCAACA TCACCTCGGT ACACGAGTTC ATTCCCTGGG AGGGCTACAG CGCCTACACC AGCGCCAAGG CGGGACTCTC CATGTTCACC AAGACCCTTG CCCAGGAAAC GGCCGACAAG GGCATCCGCG TGGTCGCCAT CGCCCCCGGC GCTATCAAGA CCCCCATCAA CAAAGCCGTC TGGGGCAACC CCGATAGCCT CAAGGATCTC GACGACAAGA TCGCCATGGA ACGCCTTGGC ACGCCGGAGG AGATCGGCCA TGTCGCGGCC TTCCTCGCCA GCGACCTGGC CAGCTACGTT ACCGGCACCA CCATCGCCGT CGATGGCGGC ATGCTCATCT ACCCCGATTT CCGTCATGGC GGCTAA
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Protein sequence | MIAIDLTGRR ALVTGASGGL GQAIAEILAA AGAQVAVHYR KGQAEAEQVV AAIQGKGGKA QAFQADISDP AAVERLLREI DGAFGGLDIL VNNAGMDGPR AVVGDDDPQL WEKVLAVDLV GPYYCARAAI PRMEKCGCGV IINITSVHEF IPWEGYSAYT SAKAGLSMFT KTLAQETADK GIRVVAIAPG AIKTPINKAV WGNPDSLKDL DDKIAMERLG TPEEIGHVAA FLASDLASYV TGTTIAVDGG MLIYPDFRHG G
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