Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1308 |
Symbol | |
ID | 4887545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 1232694 |
End bp | 1233464 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640131247 |
Product | short chain dehydrogenase |
Protein accession | YP_001062305 |
Protein GI | 126444835 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.480054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC CCGTGCAGGC GATCGCGCTC GCCGGCCGCC GCGTGCTCGT CACGGGCGGC GCGCGCGGGC TCGGCGCGGC ATTCGTCGAG GCGCTCGTCG CGGCGGGCGC GAAAGTGGCG TTCGGCGACG TGCTCGACGC GGAAGGCCGT GCGCTCGCGC AGCGCCTGCG CGACGCGGGG CACGACGCGC ACTTCATCGC GCTCGACCTC GCGGCCCCCG CCAGCGTGGC CGCCTTCGTC GACGAAGGCG CGTGCGTGCT CGGCGGCCTC GACGGCCTCG TCAACAACGC GGCGATCACG AACTCGGGCG GCAAGCGCGC AACCGAGCTG TCGATCGACA CGTGGGACGC GGTGATGAGC GTCAACGCGC GCGGCGTCTG GCTCGCGTGC AACGCGGCGC TGCCGCATCT CGCGCGCTCG GGGCGCGGCG CGATCGTGAA TCTCGCGTCC GACACCGCGT TGTGGGGCGC GCCGAAGCTG CTCGCCTACG TCGCGAGCAA AGGCGCGGTG ATCGCGATGA CGCACGCGCT CGCCCGCGAG TTCGGTGAAC AGGGCGTGAC GGTCAACGCG GTCGCGCCGG GCCTGACCGA AGTCGAGGCG ACCGCGTACG TGCCGGCCGA GCGCCACGAA TACTACTTGC AGGGCCGCGC GCTACCGCGC GCGCAAGTGC CGGCGGACGT GACGGGGCCG GTGCTGTTCC TGCTGTCCGA CGCCGCGCGT TTCGTCACGG GCCAGTTGCT GCCCGTGAAC GGCGGCTTCG TGATGCATTG A
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Protein sequence | MSAPVQAIAL AGRRVLVTGG ARGLGAAFVE ALVAAGAKVA FGDVLDAEGR ALAQRLRDAG HDAHFIALDL AAPASVAAFV DEGACVLGGL DGLVNNAAIT NSGGKRATEL SIDTWDAVMS VNARGVWLAC NAALPHLARS GRGAIVNLAS DTALWGAPKL LAYVASKGAV IAMTHALARE FGEQGVTVNA VAPGLTEVEA TAYVPAERHE YYLQGRALPR AQVPADVTGP VLFLLSDAAR FVTGQLLPVN GGFVMH
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