| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3834 |
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| Symbol | |
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| ID | 3936314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3927709 |
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| End bp | 3928479 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906212 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511776 |
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| Protein GI | 89056325 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.140905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATT TCGCGACCTA TCCTGACCTG AACGGAGCCT CGGTGTTCAT CACCGGCGGC
GGCTCCGGCA TTGGCGCGAG CCTTACGGAG GGATTCTTGC GGCAAGGTGC GAAGGTGGCC
TTCGTGCAGC GGTCTGAGGC CTCAGAGTTC GCCGAGGAGA TGGAGGCCGC AACAGGCAAT
CGCCCCCTGG CCCTGATTTG CGATATCACC GACACCAACC ATTTGCGCGC CTGCATCGCA
GAAGCCTCTA CCGCCCACGG CACAGTCACG GTGCTGGTCA ACAACGCCGC CAACGACAAA
CGTCACAAGA CGCTGGAGGT TGATGAAGCG TTTTGGGACT GGTCCCAGTC GATCAACCTC
AAGGCCTATT TCTTCGGCTG CCAGGCGGTG ATTGAGGGGA TGCAGGCCAT GGGCGGCGGC
GCGATCATTA ACATGTCGTC GATCAGCTAC ATGATGGGCA ATGCGGGCTA TCCGGCCTAC
ACCAGCGCCA ATGGCGGCAT CACGGCCATG ACCCGCAGCC TTGCGCGTGA ATTTGGCCCC
GATAATATCC GCGTCAATGC GCTGGCCCCG GGCTGGGTCC TGACCGACAA ACAGCTGGAA
ATGTGGGCAT CCCCCGAAGA TCTCGCCGCC CATATGGAGC GGATGTGCCT CAAGGAGCAT
CTGGAGCCCT CCGACATTGT CGGCGGCACC CTGTTTCTGG CCTCCAAGGC CTCCAAGGCG
ATGACCGGAC AGACCATGGT GATTGATGGC GGCGTGGTGA CGACGGGATG A
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| Protein sequence | MTDFATYPDL NGASVFITGG GSGIGASLTE GFLRQGAKVA FVQRSEASEF AEEMEAATGN
RPLALICDIT DTNHLRACIA EASTAHGTVT VLVNNAANDK RHKTLEVDEA FWDWSQSINL
KAYFFGCQAV IEGMQAMGGG AIINMSSISY MMGNAGYPAY TSANGGITAM TRSLAREFGP
DNIRVNALAP GWVLTDKQLE MWASPEDLAA HMERMCLKEH LEPSDIVGGT LFLASKASKA
MTGQTMVIDG GVVTTG
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