| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2495 |
|---|
| Symbol | |
|---|
| ID | 3693958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 3009412 |
|---|
| End bp | 3010182 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637732749 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_337645 |
|---|
| Protein GI | 76817308 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CCGTGCAGGC GATCGCGCTC GCCGGCCGCC GCGTGCTCGT CACGGGCGGC
GCGCGCGGGC TCGGCGCGGC ATTCGTCGAG GCGCTCGTCG CGGCGGGCGC GAAAGTGGCG
TTCGGCGACG TGCTCGACGC GGAAGGCCGT GCGCTCGCGC AGCGCCTGCG CGACGCGGGG
CACGACGCGC ACTTCATCGC GCTCGACCTC GCAGCCCCCG CCAGCGTGGC CGCCTTCGTC
GACGAAGGCG CGCGCGTGCT CGGCGGCCTC GACGGCCTCG TCAACAACGC GGCGATCACG
AACTCGGGCG GCAAGCGCGC AACCGAGCTG TCGATCGACA CGTGGGACGC GGTGATGAAC
GTCAACGCGC GCGGCGTCTG GCTCGCGTGC AACGCGGCGC TGCCGCATCT CGCGCGCTCG
GGGCGCGGCG CGATCGTGAA TCTCGCGTCC GACACCGCGT TGTGGGGCGC GCCGAAGCTG
CTCGCCTACG TCGCGAGCAA AGGCGCGGTG ATCGCGATGA CGCACGCGCT CGCGCGCGAG
TTCGGTGAAC AGGGCGTGAC GGTCAACGCG GTCGCGCCGG GCCTGACCGA AGTCGAGGCG
ACCGCGTACG TGCCGGCCGA GCGCCACGAA TACTACTTGC AGGGCCGCGC GCTACCGCGC
GCGCAAGTGC CGGCGGACGT GACGGGGCCG GTGCTGTTCC TGCTGTCCGA CGCCGCGCGT
TTCGTCACGG GCCAGTTGCT GCCCGTGAAC GGCGGCTTCG TGATGCATTG A
|
|---|
| Protein sequence | MSAPVQAIAL AGRRVLVTGG ARGLGAAFVE ALVAAGAKVA FGDVLDAEGR ALAQRLRDAG
HDAHFIALDL AAPASVAAFV DEGARVLGGL DGLVNNAAIT NSGGKRATEL SIDTWDAVMN
VNARGVWLAC NAALPHLARS GRGAIVNLAS DTALWGAPKL LAYVASKGAV IAMTHALARE
FGEQGVTVNA VAPGLTEVEA TAYVPAERHE YYLQGRALPR AQVPADVTGP VLFLLSDAAR
FVTGQLLPVN GGFVMH
|
|---|
| |