Gene Tpet_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1020 
Symbol 
ID5171531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1049087 
End bp1049827 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID640563538 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001244614 
Protein GI148270154 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0122832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTTG AAGGAAAGGT GTGTCTGATC ACAGGGGCTG CAAGCGGGAT AGGAAAAGCC 
ACCACTCTTC TTTTCATGCA GGAAGGCGCC ACAGTGATCG CTGGCGATAT CTCGAAAGAA
AATCTCGACT CTCTTGTGAA AGAAGCAGAA GGACTCCCGG GAAAAGTCGA TCCCTACATT
TTGAATGTGA CCGACAGAGA TCAAATAAAG GAAGTCGTGG AAAAAGTCGT TCAAAAGTAC
GGCCGGATTG ATGTTCTGGT GAACAACGCG GGAATAACAA GGGATGCGCT TCTTGTGAGG
ATGAAAGAAG AAGACTGGGA TGCGGTAATA AACGTGAATC TGAAGGGTGT TTTCAACGTG
ACTCAGATGG TGGTGCCCTA CATGATCAAA CAGAGGAACG GTTCGATCGT GAACGTCTCC
TCTGTCGTTG GAATATACGG GAATCCCGGT CAGACGAACT ACGCGGCGTC GAAGGCAGGA
GTAATAGGAA TGACCAAGAC GTGGGCGAAG GAACTCGCTG GAAGAAACAT CAGAGTGAAC
GCTGTGGCAC CCGGGTTCAT AGAAACGCCC ATGACCGAAA AACTTCCAGA AAAAGCACGT
GAAGCGGCCC TTTCAAGGAT ACCACTTGGG AGGTTTGGAA AACCAGAAGA GGTGGCGCAG
GTTATACTCT TCCTCGCTTC GGACGAGTCG AGTTACGTCA CAGGACAGGT GATAGGAATA
GATGGGGGCC TCGTGATCTG A
 
Protein sequence
MRLEGKVCLI TGAASGIGKA TTLLFMQEGA TVIAGDISKE NLDSLVKEAE GLPGKVDPYI 
LNVTDRDQIK EVVEKVVQKY GRIDVLVNNA GITRDALLVR MKEEDWDAVI NVNLKGVFNV
TQMVVPYMIK QRNGSIVNVS SVVGIYGNPG QTNYAASKAG VIGMTKTWAK ELAGRNIRVN
AVAPGFIETP MTEKLPEKAR EAALSRIPLG RFGKPEEVAQ VILFLASDES SYVTGQVIGI
DGGLVI