| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1020 |
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| Symbol | |
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| ID | 5171531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1049087 |
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| End bp | 1049827 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563538 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001244614 |
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| Protein GI | 148270154 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0122832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTTG AAGGAAAGGT GTGTCTGATC ACAGGGGCTG CAAGCGGGAT AGGAAAAGCC
ACCACTCTTC TTTTCATGCA GGAAGGCGCC ACAGTGATCG CTGGCGATAT CTCGAAAGAA
AATCTCGACT CTCTTGTGAA AGAAGCAGAA GGACTCCCGG GAAAAGTCGA TCCCTACATT
TTGAATGTGA CCGACAGAGA TCAAATAAAG GAAGTCGTGG AAAAAGTCGT TCAAAAGTAC
GGCCGGATTG ATGTTCTGGT GAACAACGCG GGAATAACAA GGGATGCGCT TCTTGTGAGG
ATGAAAGAAG AAGACTGGGA TGCGGTAATA AACGTGAATC TGAAGGGTGT TTTCAACGTG
ACTCAGATGG TGGTGCCCTA CATGATCAAA CAGAGGAACG GTTCGATCGT GAACGTCTCC
TCTGTCGTTG GAATATACGG GAATCCCGGT CAGACGAACT ACGCGGCGTC GAAGGCAGGA
GTAATAGGAA TGACCAAGAC GTGGGCGAAG GAACTCGCTG GAAGAAACAT CAGAGTGAAC
GCTGTGGCAC CCGGGTTCAT AGAAACGCCC ATGACCGAAA AACTTCCAGA AAAAGCACGT
GAAGCGGCCC TTTCAAGGAT ACCACTTGGG AGGTTTGGAA AACCAGAAGA GGTGGCGCAG
GTTATACTCT TCCTCGCTTC GGACGAGTCG AGTTACGTCA CAGGACAGGT GATAGGAATA
GATGGGGGCC TCGTGATCTG A
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| Protein sequence | MRLEGKVCLI TGAASGIGKA TTLLFMQEGA TVIAGDISKE NLDSLVKEAE GLPGKVDPYI
LNVTDRDQIK EVVEKVVQKY GRIDVLVNNA GITRDALLVR MKEEDWDAVI NVNLKGVFNV
TQMVVPYMIK QRNGSIVNVS SVVGIYGNPG QTNYAASKAG VIGMTKTWAK ELAGRNIRVN
AVAPGFIETP MTEKLPEKAR EAALSRIPLG RFGKPEEVAQ VILFLASDES SYVTGQVIGI
DGGLVI
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