| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0994 |
|---|
| Symbol | |
|---|
| ID | 6274132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1186747 |
|---|
| End bp | 1187493 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613044 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_001877603 |
|---|
| Protein GI | 187735491 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.931337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGT TAGCAGGTAA AACAGCCATC GTTACCGGCG CGGGCCGCGG AATCGGCAAT
GCCGTCGCGC GCCGCTTCGC TTCGGAAGGA GCCAGGGTCA TCCTGATCAG CCGCAGTCCA
TCCAGCTGCG GGGGGGCCGC AGAAGAAATC AACAAGGAAT TTCCGGATTC CTGCAAGGCC
TACCCCTGCG ACGTAGCGGA TTACGCGGCC GTTCAGGAAA CCATGGCCGC CATTTTGAAA
GACTTCCCGC AGATTGACAT CCTGGTGAAC AACGCCGGCA TCACGCGGGA CTCCCTGATG
CTCCGCATGA AAGAGGAAGA CTGGGATGCC GTTCTGGACA CCAACCTGAA AAGCGCGTTC
AATACGGTCA AGGCCCTCCA GCGCGTTCTC ATGAAATCCC CGGCCGGGCG CATCATCAAC
ATGAGCTCCG TCATCGGTCT CGTCGGCAAC ATCGGCCAGG CCAATTACGC CGCTTCCAAG
GCGGGCCTCA TCGGTTTCAC CAAATCACTG GCTCAGGAAT TCGCTCCGCG CAAAGTCACG
TGCAACGCCA TTGCTCCCGG CTTCATCTCC ACGGAAATGT CCAATGCCAT TCCCGACAAT
CTCAAGGAAG AAATCGTTAA GAAAATACCT TTGAAAGAAC AAGGTTCCGT GGAAGATATC
GCCGCCCTGA CGGCCTTCCT TGCCTCTGAC GATGCCCGTT ACATCACCGG GCAGGTCATT
GCCTGCGACG GAGGCATGAC GATGTAG
|
|---|
| Protein sequence | MQKLAGKTAI VTGAGRGIGN AVARRFASEG ARVILISRSP SSCGGAAEEI NKEFPDSCKA
YPCDVADYAA VQETMAAILK DFPQIDILVN NAGITRDSLM LRMKEEDWDA VLDTNLKSAF
NTVKALQRVL MKSPAGRIIN MSSVIGLVGN IGQANYAASK AGLIGFTKSL AQEFAPRKVT
CNAIAPGFIS TEMSNAIPDN LKEEIVKKIP LKEQGSVEDI AALTAFLASD DARYITGQVI
ACDGGMTM
|
|---|
| |