Gene Amuc_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0994 
Symbol 
ID6274132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1186747 
End bp1187493 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content57% 
IMG OID642613044 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001877603 
Protein GI187735491 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.931337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGT TAGCAGGTAA AACAGCCATC GTTACCGGCG CGGGCCGCGG AATCGGCAAT 
GCCGTCGCGC GCCGCTTCGC TTCGGAAGGA GCCAGGGTCA TCCTGATCAG CCGCAGTCCA
TCCAGCTGCG GGGGGGCCGC AGAAGAAATC AACAAGGAAT TTCCGGATTC CTGCAAGGCC
TACCCCTGCG ACGTAGCGGA TTACGCGGCC GTTCAGGAAA CCATGGCCGC CATTTTGAAA
GACTTCCCGC AGATTGACAT CCTGGTGAAC AACGCCGGCA TCACGCGGGA CTCCCTGATG
CTCCGCATGA AAGAGGAAGA CTGGGATGCC GTTCTGGACA CCAACCTGAA AAGCGCGTTC
AATACGGTCA AGGCCCTCCA GCGCGTTCTC ATGAAATCCC CGGCCGGGCG CATCATCAAC
ATGAGCTCCG TCATCGGTCT CGTCGGCAAC ATCGGCCAGG CCAATTACGC CGCTTCCAAG
GCGGGCCTCA TCGGTTTCAC CAAATCACTG GCTCAGGAAT TCGCTCCGCG CAAAGTCACG
TGCAACGCCA TTGCTCCCGG CTTCATCTCC ACGGAAATGT CCAATGCCAT TCCCGACAAT
CTCAAGGAAG AAATCGTTAA GAAAATACCT TTGAAAGAAC AAGGTTCCGT GGAAGATATC
GCCGCCCTGA CGGCCTTCCT TGCCTCTGAC GATGCCCGTT ACATCACCGG GCAGGTCATT
GCCTGCGACG GAGGCATGAC GATGTAG
 
Protein sequence
MQKLAGKTAI VTGAGRGIGN AVARRFASEG ARVILISRSP SSCGGAAEEI NKEFPDSCKA 
YPCDVADYAA VQETMAAILK DFPQIDILVN NAGITRDSLM LRMKEEDWDA VLDTNLKSAF
NTVKALQRVL MKSPAGRIIN MSSVIGLVGN IGQANYAASK AGLIGFTKSL AQEFAPRKVT
CNAIAPGFIS TEMSNAIPDN LKEEIVKKIP LKEQGSVEDI AALTAFLASD DARYITGQVI
ACDGGMTM