Gene RSP_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3963 
Symbol 
ID3712021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp90154 
End bp90909 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID640069376 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_345243 
Protein GI77404669 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.680971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGGT TCGAAGGACG GACCGCGCTC GTCACCGGCG GCGCGAACGG GATCGGCCGT 
GCCAGCGCGA TCGCATTCGC CGAGCAGGGC GCCCGCGTGG GCATCCTCGA CATCGAGGAG
GGCCCGCTGG CCGAGACCGC CGAGGCGATC CGCGCCAAGG GCGGGCGCGT GGTGACCGTC
GTCACCGACA TGCGCGACCG CGCAGCCGTC AAGGCCGCCA TCGGTCAGGT CGAGGCCGAA
CTCGGGCCGA TCGACCTCCT CCTCAACAAC GTGGGTCAGA CCGCGCGCAA GAATGCCTCG
GAATTCCTCG ATTCCGTGCC CGAGACCTGG GACTTCGTGG TGGATCTGAA CCTCATGGTG
ACCTTCTACG TCACCTGGAC GGTCGCCAAG GGCATGAAGG AGCGCGGCTT CGGCCGCATC
GTGAACATCT CGTCGGATTC GACCCTCGTG GGCGAGCGCA GCATCGTCGA CTATGTCGCG
GCGAAATCGG GCGTCTCGGG CTTCACCCGC GGGCTTGCGC GCGAACTCGC GCCCTTCGGC
ATCACCGTGA ATGCGGTCGC CCCCGGCGTG ACCAACACCC GCGGCCCGAA GCAGCTGCCG
AAGGAAGTCT ACGATGCGGC GCTGGCCGAG ATCCCGCTCG GCCATCTGGC CGAGCCCGAG
GATATCGCCA ATGCGATCAC CTTCCTCGCC AGCCAGGAGG CGCGCTGCAT CACCGGACAG
ATGCTGACCG TCAACGGCGG CCGGATCTTC TACTGA
 
Protein sequence
MTRFEGRTAL VTGGANGIGR ASAIAFAEQG ARVGILDIEE GPLAETAEAI RAKGGRVVTV 
VTDMRDRAAV KAAIGQVEAE LGPIDLLLNN VGQTARKNAS EFLDSVPETW DFVVDLNLMV
TFYVTWTVAK GMKERGFGRI VNISSDSTLV GERSIVDYVA AKSGVSGFTR GLARELAPFG
ITVNAVAPGV TNTRGPKQLP KEVYDAALAE IPLGHLAEPE DIANAITFLA SQEARCITGQ
MLTVNGGRIF Y