Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3963 |
Symbol | |
ID | 3712021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 90154 |
End bp | 90909 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640069376 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_345243 |
Protein GI | 77404669 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.680971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGGT TCGAAGGACG GACCGCGCTC GTCACCGGCG GCGCGAACGG GATCGGCCGT GCCAGCGCGA TCGCATTCGC CGAGCAGGGC GCCCGCGTGG GCATCCTCGA CATCGAGGAG GGCCCGCTGG CCGAGACCGC CGAGGCGATC CGCGCCAAGG GCGGGCGCGT GGTGACCGTC GTCACCGACA TGCGCGACCG CGCAGCCGTC AAGGCCGCCA TCGGTCAGGT CGAGGCCGAA CTCGGGCCGA TCGACCTCCT CCTCAACAAC GTGGGTCAGA CCGCGCGCAA GAATGCCTCG GAATTCCTCG ATTCCGTGCC CGAGACCTGG GACTTCGTGG TGGATCTGAA CCTCATGGTG ACCTTCTACG TCACCTGGAC GGTCGCCAAG GGCATGAAGG AGCGCGGCTT CGGCCGCATC GTGAACATCT CGTCGGATTC GACCCTCGTG GGCGAGCGCA GCATCGTCGA CTATGTCGCG GCGAAATCGG GCGTCTCGGG CTTCACCCGC GGGCTTGCGC GCGAACTCGC GCCCTTCGGC ATCACCGTGA ATGCGGTCGC CCCCGGCGTG ACCAACACCC GCGGCCCGAA GCAGCTGCCG AAGGAAGTCT ACGATGCGGC GCTGGCCGAG ATCCCGCTCG GCCATCTGGC CGAGCCCGAG GATATCGCCA ATGCGATCAC CTTCCTCGCC AGCCAGGAGG CGCGCTGCAT CACCGGACAG ATGCTGACCG TCAACGGCGG CCGGATCTTC TACTGA
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Protein sequence | MTRFEGRTAL VTGGANGIGR ASAIAFAEQG ARVGILDIEE GPLAETAEAI RAKGGRVVTV VTDMRDRAAV KAAIGQVEAE LGPIDLLLNN VGQTARKNAS EFLDSVPETW DFVVDLNLMV TFYVTWTVAK GMKERGFGRI VNISSDSTLV GERSIVDYVA AKSGVSGFTR GLARELAPFG ITVNAVAPGV TNTRGPKQLP KEVYDAALAE IPLGHLAEPE DIANAITFLA SQEARCITGQ MLTVNGGRIF Y
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