| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2100 |
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| Symbol | |
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| ID | 4673942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2221236 |
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| End bp | 2221988 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639839177 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_986351 |
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| Protein GI | 121594455 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0527344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG TAGAAAACAA AGTGATTTTG GTAACCGGTG GTGCCATGGG CATGGGCCGC
TCGCACAGCG AGCTGCTGGC AGCCCAGGGG GCCTGGGTGT TCGTGGCCGA CGTGAATGCG
ACAGAGGGGC AAGCCACCGT GGACAGCATC CGCAAAAACG GTGGCAAGGC CGACTTTTTG
GAGCTGGATG TGACGCAAGA AGCCCAATGG AACGCCGCAC TGGCCCAAAT CACCGAGCGC
GCGGGCCGTC TGGATGTGCT GGTGAACAAC GCCGGAATCC TGATCCTCAA GCCGATGCAA
GACACGACCA ACGAAGAGTG GGATCGCGTC TTCGACGTGA ACGTGCGCGG CCTGTTCATC
GGCACGCGGG CGGCAGTGCC GCTGATGCAA AAAGCCGGTG GCGGCACCAT CGTCAACGTG
TCGTCCATTT ACGGCCTGGT TGGTGCCCCC GGTGCCAGCG CCTACGAAGC CTCCAAGGGC
GCGGTGCGTT TGTTCACCAA GTCTTGCGCG GTGGATCTGG CACCGTTCAA TATCCGCGTC
AACTCGGTGC ATCCGGGCGT GATTGAAACC CAGATGACCA AGGCGATGTT GGATGACCCA
ATCATTCGCC CGGCGCTGCT CGGCCCCACG CTGCTCAAGC GCCCGGCGCA GCCCATAGAG
GTGTCGCAGG CGGTGCTGTT CCTGGCCTCG GACGAATCCT CGTTCGTGCA TGGCGCAGAA
CTGGTCGTTG ACGGCGGCTA CACAGCCAAC TGA
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| Protein sequence | MKRVENKVIL VTGGAMGMGR SHSELLAAQG AWVFVADVNA TEGQATVDSI RKNGGKADFL
ELDVTQEAQW NAALAQITER AGRLDVLVNN AGILILKPMQ DTTNEEWDRV FDVNVRGLFI
GTRAAVPLMQ KAGGGTIVNV SSIYGLVGAP GASAYEASKG AVRLFTKSCA VDLAPFNIRV
NSVHPGVIET QMTKAMLDDP IIRPALLGPT LLKRPAQPIE VSQAVLFLAS DESSFVHGAE
LVVDGGYTAN
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