Gene Bcenmc03_6360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6360 
Symbol 
ID6125283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp395847 
End bp396635 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID641647373 
Productshort chain dehydrogenase 
Protein accessionYP_001773970 
Protein GI170734856 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCC TTGCTGGCAA AGTCGCGCTC GTCACCGGCG GCGCCACGCT GATCGGCGCC 
GCGGTCGCGC AGGACCTGAG CCGCGCCGGT GCGTGCGTCG CGATCCTCGA TCTCGATGCG
GACAACGGCG CACGCGTGGC CGCATCGCTC GGCGAACGGG CGCTGTTCAT CGCGCTCGAC
ATCACCGACG ATCGTGCGAT CGAGCGCGCG GTCGCGACGA TCGTCGAGCG GTTCGGCGCG
ATCGACGTGC TCGTCAACCT CGCGTGCAGC TATGTCGACA ACGGCATCCA CGCGACCCGC
AACGACTGGC TCGCCGCGAT GGACGTCAAC GTCGTGTCGG CCGCGATGCT CGCGAAGGCC
GTGCATCCGC ACATGGCCCG GCGCGGCGGC GGCGCGATCG TGAACTTCAG CTCGATCTCC
GCACAGTGCG CGCAAACCGG CCGCTGGCTG TATCCGACCT CGAAAGCCGC GATCCGCCAG
CTCACGCGCA GCATGGCGAT GGATCTCGCG CCCGATCGCA TCCGCGTCAA CTCGGTATCG
CCGGGCTGGA CCTGGTCGCG CGTGATGGAC GAGATGACGC ACGGCGACCG CGCGAAGACC
GATCGCGTCG CCGCGCCGTT CCACCTGCTC CGACGCGTCG GCGATCCGTC GGAAGTCGCG
CAGGTCGTCA CGTTCCTGTG CAGCGACGCG GCGAGCTTCG TGACCGGCGC CGACTACGCG
GTGGACGGCG GCTATGCCGC GATGGGCCCC GAACAGGCGG TGCCGGCGAT TCCCCGTCTC
GCGGAGTGA
 
Protein sequence
MNALAGKVAL VTGGATLIGA AVAQDLSRAG ACVAILDLDA DNGARVAASL GERALFIALD 
ITDDRAIERA VATIVERFGA IDVLVNLACS YVDNGIHATR NDWLAAMDVN VVSAAMLAKA
VHPHMARRGG GAIVNFSSIS AQCAQTGRWL YPTSKAAIRQ LTRSMAMDLA PDRIRVNSVS
PGWTWSRVMD EMTHGDRAKT DRVAAPFHLL RRVGDPSEVA QVVTFLCSDA ASFVTGADYA
VDGGYAAMGP EQAVPAIPRL AE