| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0405 |
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| Symbol | |
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| ID | 5410313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 391228 |
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| End bp | 391965 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640867619 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001403568 |
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| Protein GI | 154149950 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTC TCGATGGAAA AGTGGCTTTT ATCAGTGGCG GTGCCAATAG CCTTGGTGCC
GCAAATGCCA GCCTCTTTGC TGCTGAAGGT GCCAGGGTTA TCATTGCCGA TGTACTCGAA
ACAGAGGGGA AAAATCTTGC AAAATCTCTT GGCCCCCGGG GTACTTTTGT TTTTCTTGAT
GTAACCGACC CTTCCGGGTG GATACGTGCA GCAGAGATTG CAGAAAATGC ATACGGGCCG
GTGAATATCC TCGTGAATAA TGCAGGAAGA GTAAACCACG TGCCGTTCGA TGAATGTACC
AACCAACAGT TTGGAGAGAT TATCGAGGCA AATCTTTACG GGACTTTTTA CGGTATTAAA
ACGATTATCC CCTCAATGCA AAAAGCGGGA AGTGGCACTA TCATAAACAT CTCTTCGGTA
TCCGGACTTC GTGGCTACCC TATGATGCCC GGATGTGTCA CTGCACATTG GGGAGTACGC
GGCCTGACGA AGTCTGCCGC CCTTGATCTC GCCCGTTACC ATATTCGGGT AAATTCGGTT
CATTCCGGGG AAGTCCTGAC CCCAGCCACC AAATCAGGTG ATATTGAAAC CGGACATGTT
GCTATGAACC GCCCGGCTAC CCCTGATGAG ATCGCCCGTG TCGTAGTATT CCTCGCCACT
GATGAATCCA GTTTTATTAC CGGGGCAGAG ATTGCCGTTG ATGGCGGTGA AAGTGCTGGT
CTCGCAAATT GCAGATAA
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| Protein sequence | MGRLDGKVAF ISGGANSLGA ANASLFAAEG ARVIIADVLE TEGKNLAKSL GPRGTFVFLD
VTDPSGWIRA AEIAENAYGP VNILVNNAGR VNHVPFDECT NQQFGEIIEA NLYGTFYGIK
TIIPSMQKAG SGTIINISSV SGLRGYPMMP GCVTAHWGVR GLTKSAALDL ARYHIRVNSV
HSGEVLTPAT KSGDIETGHV AMNRPATPDE IARVVVFLAT DESSFITGAE IAVDGGESAG
LANCR
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