Gene Pput_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3860 
SymbolfabG 
ID5194112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4341203 
End bp4341952 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID640588332 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001269168 
Protein GI148549066 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.840744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0763537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC AACTTACACT CGAAGGCAAA GTGGCCCTGG TTCAGGGCGG TTCCCGAGGC 
ATTGGTGCAG CCATCGTGCG GCGCCTGGCC CGCGAAGGCG CGCAAGTGGC CTTCACCTAT
GTCAGCTCTG CCGGCCCGGC TGAAGAACTG GCTCGAGAAA TTACCGAAAA CGGCGGCAAA
GCCTTGGCCC TACGGGCTGA CAGCGCTGAT GCCGCGGCCG TGCAACTGGC GGTGGATGAC
ACCGTAAAAG CCTTGGGCCG GCTGGATATC CTGGTCAACA ACGCCGGCGT GCTGGCAGTG
GCCCCGGTGA CAGAGTTCGA CCTGGCCGAC TTCGATCGCA TGCTGGCCGT GAACGTACGC
AGCGTGTTCG TCGCCAGCCA GGCCGCCGCA CGCTATATGG GCCAGGGGGG TCGTATCATC
AACATTGGCA GCACCAACGC TGAACGCATG CCGTTTGCCG GTGGTGCACC GTACGCCATG
AGCAAGTCGG CACTGGTTGG CCTGACCCGC GGCATGGCAC GCGACCTCGG GCCGCAGGGC
ATTACCGTGA ACAATGTGCA GCCCGGCCCA GTGGACACCG ACATGAACCC GGCCAGTGGC
GAGTTTGCCG AGAGCCTGAT TCCGCTGATG GCCATTGGGC GGTATGGCGA GCCGGAGGAG
ATTGCCAGCT TTGTGGCATA CCTGGCCGGC CCTGAAGCCG GGTATATCAC CGGGGCCAGC
CTGACTGTAG ATGGTGGGTT TGCAGCCTGA
 
Protein sequence
MSKQLTLEGK VALVQGGSRG IGAAIVRRLA REGAQVAFTY VSSAGPAEEL AREITENGGK 
ALALRADSAD AAAVQLAVDD TVKALGRLDI LVNNAGVLAV APVTEFDLAD FDRMLAVNVR
SVFVASQAAA RYMGQGGRII NIGSTNAERM PFAGGAPYAM SKSALVGLTR GMARDLGPQG
ITVNNVQPGP VDTDMNPASG EFAESLIPLM AIGRYGEPEE IASFVAYLAG PEAGYITGAS
LTVDGGFAA