More than 300 homologs were found in PanDaTox collection
for query gene Swoo_1011 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  62.37 
 
 
673 aa  800    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  100 
 
 
675 aa  1349    Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_004347  SO_3642  methyl-accepting chemotaxis protein  63.11 
 
 
673 aa  766    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  62.37 
 
 
673 aa  799    Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  73.33 
 
 
674 aa  964    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0986  methyl-accepting chemotaxis sensory transducer  61.39 
 
 
673 aa  749    Shewanella putrefaciens CN-32  Bacteria  normal  0.603679  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  63.56 
 
 
673 aa  816    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  62.37 
 
 
673 aa  798    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  67.56 
 
 
673 aa  876    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  62.52 
 
 
673 aa  800    Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  62.67 
 
 
673 aa  777    Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  60.3 
 
 
673 aa  810    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  62.37 
 
 
673 aa  777    Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  62.22 
 
 
673 aa  776    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  61.04 
 
 
673 aa  784    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  73.93 
 
 
675 aa  932    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  42.46 
 
 
674 aa  492  9.999999999999999e-139  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  43.51 
 
 
672 aa  462  1e-129  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  41.94 
 
 
674 aa  460  9.999999999999999e-129  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
543 aa  257  4e-67  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
541 aa  248  3e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.35 
 
 
637 aa  247  4e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44 
 
 
679 aa  244  3e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
636 aa  244  3.9999999999999997e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
674 aa  244  6e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.05 
 
 
637 aa  244  6e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  31.42 
 
 
672 aa  243  1e-62  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  31.52 
 
 
666 aa  242  2e-62  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42 
 
 
640 aa  238  2e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
638 aa  238  3e-61  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.43 
 
 
640 aa  237  5.0000000000000005e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  34.16 
 
 
653 aa  237  5.0000000000000005e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_007954  Sden_2638  chemotaxis sensory transducer  30.64 
 
 
675 aa  237  5.0000000000000005e-61  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
638 aa  236  1.0000000000000001e-60  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40.86 
 
 
629 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  37.13 
 
 
638 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
638 aa  235  2.0000000000000002e-60  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
552 aa  234  5e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  40.62 
 
 
642 aa  233  8.000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  37.09 
 
 
653 aa  232  1e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009438  Sputcn32_1313  methyl-accepting chemotaxis sensory transducer  29.49 
 
 
675 aa  232  2e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.23 
 
 
681 aa  230  5e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.22 
 
 
564 aa  230  6e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  42.94 
 
 
541 aa  230  7e-59  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
438 aa  229  9e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  42.04 
 
 
572 aa  229  9e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  28.53 
 
 
675 aa  229  1e-58  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.55 
 
 
640 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  28.53 
 
 
675 aa  229  2e-58  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
638 aa  228  3e-58  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
552 aa  227  4e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  42.18 
 
 
647 aa  227  4e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.48 
 
 
624 aa  227  5.0000000000000005e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1402  methyl-accepting chemotaxis sensory transducer  28.24 
 
 
675 aa  227  5.0000000000000005e-58  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.54 
 
 
642 aa  226  8e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  40.97 
 
 
640 aa  226  9e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1386  methyl-accepting chemotaxis sensory transducer  28.53 
 
 
675 aa  226  9e-58  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.18 
 
 
716 aa  226  9e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
572 aa  226  1e-57  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.15 
 
 
713 aa  224  4e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  37.28 
 
 
541 aa  224  4.9999999999999996e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
573 aa  223  7e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
634 aa  223  7e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  37.89 
 
 
633 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
544 aa  223  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
540 aa  222  9.999999999999999e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  37.93 
 
 
559 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.41 
 
 
676 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.03 
 
 
712 aa  222  1.9999999999999999e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  39.77 
 
 
547 aa  222  1.9999999999999999e-56  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  35.51 
 
 
712 aa  221  1.9999999999999999e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
541 aa  221  3e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1215  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
678 aa  220  7.999999999999999e-56  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  38.94 
 
 
621 aa  219  1e-55  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  38.56 
 
 
639 aa  219  1e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  39.33 
 
 
553 aa  219  1e-55  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  42.2 
 
 
596 aa  219  1e-55  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
573 aa  219  2e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  47.52 
 
 
646 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
573 aa  219  2e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
650 aa  218  4e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  37.5 
 
 
568 aa  217  5e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
639 aa  217  5.9999999999999996e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
541 aa  217  5.9999999999999996e-55  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  38.58 
 
 
553 aa  217  5.9999999999999996e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
541 aa  217  7e-55  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
541 aa  217  7e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
634 aa  216  8e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  38.7 
 
 
634 aa  216  9e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
640 aa  216  9e-55  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  35.32 
 
 
541 aa  216  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  39.05 
 
 
425 aa  216  9.999999999999999e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
658 aa  215  1.9999999999999998e-54  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  38.11 
 
 
619 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  40.68 
 
 
650 aa  215  1.9999999999999998e-54  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  41.89 
 
 
647 aa  215  1.9999999999999998e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
541 aa  215  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
638 aa  214  2.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  39.08 
 
 
541 aa  214  2.9999999999999995e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
639 aa  214  3.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
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