| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1011 |
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| Symbol | |
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| ID | 6115245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1320257 |
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| End bp | 1322284 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632494 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001759399 |
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| Protein GI | 170725373 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.547128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00024543 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATGA ATGTCGCCAC AAGAGTCATT GGCGGATTTA GTGTCGTCAC CTTACTCTTG
ATAGCACTAG GTGGCGCCTC TTTGCTCACC AATAGCGAAC TGAAATCAAG CACACAAGTT
CTACAAGAGC TTAGCTTACC AGCCCTAGAG TCTAGTAGCC GTTTGATACA GGGGCTTTCT
TTGCAGGAGA AGCAGATTTT AGTTTCCTAT CATGCGACTA AATCTGAGCA ACTTCCCCCA
CTAAAAGCTC AATTTACCAA GCAGAGTCAA TCCTTTAATA CTGAGTTAAA CACGCTATCT
AGGCTTGTTA ACTCCCAAGA ACAAGCGAAT TTCACAGATG TGATAACCTC GGTTAGAACC
AGTTATCAAG ACTTTGTTGC CGAAGGTAAC AAGATGATTA TTACTCGTGA AAACTCACTC
GTCACACAAG AAAAATTACT CATAAAATTA GAGAATTTAG AGGAAGCGGC CGATGATACA
GCTTCTTTAC TTCTTGATCT GATTGACCTT GAAACCAGTG AAGACCTGAC AGATCAAGAG
ATAGCCGCAA CAGCAGGCAA CATAGATAAC AGCCTTAGCG GTATCGTGAG TACCAACTAT
GATCTGGTAA ACAGTCAGTC TCAATCACAG TTTGACACCA TCTCTAAAGA GCTTGAGTAC
CTGATCAATG AAGCAAAAAA TAAACTCGAG TACGTTAGCC GTCACTGGGA AGGTGTGGTC
GATGAAACCT TGATGGCTGA TATTAACAGC GAAGCCGATA AAGTCTTTAG CATGCTAAGT
GGCAGCGGCT CTATGCAGGC AATGAAGGGG CGTCAGCTCA GCTTTAATGT ATCAGCAGAT
CAGATGCTAA ATAAAGTGAA CAAAGATGCT GAAAACCTCA ATGTAACCAT GAATGAGCTG
ATTAAAAAGG TCGAGACCGT TTCCGCTCAG ATCAGTAACA AAGCCATTGA CGGTATCGAT
CAAGCTAGCT TTAACACTAT CATCTTAATG GTTATTGTTA TCTTTGTAGC CGTAGGCGTG
AGCTACGCAG TTATCAGCCC GCTTAGACGT TCGCTGAATA AAGTTAACAC AGCACTTAAT
ATCTTAGCCT CGGGTAACTT GACCCACAAA CTCGATGATA CAGGTCATGA TGAGTTTGCA
GAACTCTCAC GTAACTGTAA TCGACTAGTT GATAGTTTAC GGGAGCTTAT TCAGGGGATC
TTAGATCGCT CAAACCAACT GGCAGCAGCG GCAGAAGAAA CATCGGCCAT CACAACCCAA
ACCACTGTTA GCATTCAAGA GCAAAAGAGC CAAGTTGACC AAGTTGCAAC TGCAACCACC
CAATTAAACT CTAGTGCTCA ACAGGTCACT ACCAGTGCTG ATGATGCCCT ACAACAGATA
AAACAAGCCG ATGAAGAAGC GCAACATATG CGCGCTATTG CCGATGAGAA TAAGCAGACG
ATATTGGCTT TAGCCGATGA GGTTGCGAAA GCAGGTCAAG TTATCAATAA AGTTCATACT
GATAGCGCCT CAATTGGTTC AATCCTAGAT ACCATTCGCG GCATCGCTGA ACAGACTAAT
CTGCTGGCAT TAAACGCCGC AATTGAAGCA GCAAGAGCCG GCGAGCAGGG ACGTGGATTT
GCCGTTGTAG CCGATGAGGT TCGAAGCCTA GCCTCAAGAA CTCAGGACTC GACTCAAGAG
ATCCAGCAGA TGATCCAAGT ACTGCAAGCT GGAACCCAAG AAGCCGTATC TGTTATGGAA
CTAGGCCGCA GCCAAGCAAG CTCATGTGTC GATAAAACAG AGCTGGCAAA CATGGCATTG
CAAAGTATCA GTGAAGCTGT TCATCATGCC CATGATTCTG GCACCCACAT TGCTCACGCA
GCGCAAGAGC AAAGCCAGGT AAGTCAGCAA GTGTCAGAGA TGCTTGAACA TATTGCCGCA
ATATCTGAAG AGACGGCCTC AGGAGCCGAT CAGACCGCGC AATCAAGTCA TCAGGTGGCT
CAGCTTGCCG AGGAGTTACA AGCTTCTGTA GGTGAGTTTA AAGTTTAA
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| Protein sequence | MKMNVATRVI GGFSVVTLLL IALGGASLLT NSELKSSTQV LQELSLPALE SSSRLIQGLS
LQEKQILVSY HATKSEQLPP LKAQFTKQSQ SFNTELNTLS RLVNSQEQAN FTDVITSVRT
SYQDFVAEGN KMIITRENSL VTQEKLLIKL ENLEEAADDT ASLLLDLIDL ETSEDLTDQE
IAATAGNIDN SLSGIVSTNY DLVNSQSQSQ FDTISKELEY LINEAKNKLE YVSRHWEGVV
DETLMADINS EADKVFSMLS GSGSMQAMKG RQLSFNVSAD QMLNKVNKDA ENLNVTMNEL
IKKVETVSAQ ISNKAIDGID QASFNTIILM VIVIFVAVGV SYAVISPLRR SLNKVNTALN
ILASGNLTHK LDDTGHDEFA ELSRNCNRLV DSLRELIQGI LDRSNQLAAA AEETSAITTQ
TTVSIQEQKS QVDQVATATT QLNSSAQQVT TSADDALQQI KQADEEAQHM RAIADENKQT
ILALADEVAK AGQVINKVHT DSASIGSILD TIRGIAEQTN LLALNAAIEA ARAGEQGRGF
AVVADEVRSL ASRTQDSTQE IQQMIQVLQA GTQEAVSVME LGRSQASSCV DKTELANMAL
QSISEAVHHA HDSGTHIAHA AQEQSQVSQQ VSEMLEHIAA ISEETASGAD QTAQSSHQVA
QLAEELQASV GEFKV
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