More than 300 homologs were found in PanDaTox collection
for query gene BBta_0533 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_0533  methyl-accepting chemotaxis protein (MCP)  100 
 
 
712 aa  1394    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.595703 
 
 
-
 
NC_009485  BBta_0541  methyl-accepting chemotaxis protein (MCP)  60.54 
 
 
687 aa  718    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_0534  methyl-accepting chemotaxis protein (MCP)  45.83 
 
 
733 aa  488  1e-136  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.627871  normal 
 
 
-
 
NC_009485  BBta_2961  hypothetical protein  47.24 
 
 
561 aa  276  1.0000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.638324 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
675 aa  252  1e-65  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  41.15 
 
 
688 aa  251  4e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  38.39 
 
 
656 aa  251  4e-65  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
688 aa  250  6e-65  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  33.09 
 
 
688 aa  250  7e-65  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
689 aa  248  2e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_010505  Mrad2831_2546  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
649 aa  243  6e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.389712  normal 
 
 
-
 
NC_010510  Mrad2831_6098  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
649 aa  243  6e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  31.68 
 
 
688 aa  242  2e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
562 aa  240  6.999999999999999e-62  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  42.34 
 
 
562 aa  238  2e-61  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
567 aa  237  5.0000000000000005e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  42.28 
 
 
688 aa  237  6e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
691 aa  237  7e-61  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  40.9 
 
 
566 aa  236  1.0000000000000001e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  39.5 
 
 
561 aa  236  1.0000000000000001e-60  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
674 aa  236  1.0000000000000001e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  41.05 
 
 
656 aa  236  1.0000000000000001e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  41.19 
 
 
691 aa  235  2.0000000000000002e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
562 aa  235  2.0000000000000002e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  39.57 
 
 
671 aa  234  5e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  41.6 
 
 
561 aa  234  6e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  34.99 
 
 
673 aa  233  8.000000000000001e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
562 aa  233  8.000000000000001e-60  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  37.95 
 
 
698 aa  233  1e-59  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  43.09 
 
 
670 aa  231  3e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  41.55 
 
 
573 aa  231  4e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
563 aa  230  5e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4691  chemotaxis sensory transducer  32.5 
 
 
665 aa  230  6e-59  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0865  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
712 aa  230  6e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.163995 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  40.87 
 
 
565 aa  230  7e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  39.42 
 
 
567 aa  230  8e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
672 aa  229  2e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  42.23 
 
 
655 aa  229  2e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
562 aa  228  4e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  40.72 
 
 
602 aa  227  5.0000000000000005e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
560 aa  227  6e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
561 aa  226  1e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
586 aa  226  1e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
694 aa  226  1e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
572 aa  225  2e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  43.3 
 
 
552 aa  225  2e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
561 aa  225  3e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  35.08 
 
 
565 aa  224  3e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  37.93 
 
 
577 aa  224  3e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
563 aa  224  4e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  43.18 
 
 
608 aa  224  6e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
563 aa  223  6e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  44.18 
 
 
556 aa  223  7e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
558 aa  223  7e-57  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  39.95 
 
 
712 aa  223  9e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  38.23 
 
 
563 aa  222  9.999999999999999e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
561 aa  223  9.999999999999999e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  44.99 
 
 
559 aa  223  9.999999999999999e-57  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
587 aa  223  9.999999999999999e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
561 aa  222  1.9999999999999999e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
561 aa  222  1.9999999999999999e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
741 aa  222  1.9999999999999999e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  43.92 
 
 
556 aa  222  1.9999999999999999e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  41.33 
 
 
674 aa  222  1.9999999999999999e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  42.7 
 
 
561 aa  221  3e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  37.21 
 
 
566 aa  221  3e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  42.08 
 
 
561 aa  221  3.9999999999999997e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
681 aa  221  3.9999999999999997e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  37.12 
 
 
561 aa  221  5e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  39.05 
 
 
697 aa  220  8.999999999999998e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
566 aa  220  8.999999999999998e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  38.86 
 
 
542 aa  219  8.999999999999998e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  36.4 
 
 
676 aa  219  1e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
698 aa  219  1e-55  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  41.93 
 
 
558 aa  219  1e-55  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  41.94 
 
 
675 aa  219  1e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
731 aa  219  2e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
655 aa  219  2e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  41.93 
 
 
558 aa  219  2e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_007958  RPD_0840  chemotaxis sensory transducer  40.65 
 
 
712 aa  219  2e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.174635 
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
561 aa  218  2.9999999999999998e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3427  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
568 aa  218  2.9999999999999998e-55  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0133436 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
561 aa  218  2.9999999999999998e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
656 aa  218  2.9999999999999998e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0713  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
685 aa  218  4e-55  Maricaulis maris MCS10  Bacteria  normal  normal  0.862704 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.44 
 
 
716 aa  217  5e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  44.09 
 
 
561 aa  217  5.9999999999999996e-55  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_011757  Mchl_5156  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
665 aa  216  9.999999999999999e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0636207 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  40.45 
 
 
691 aa  216  9.999999999999999e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
567 aa  216  9.999999999999999e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0363  methyl-accepting chemotaxis sensory transducer  45.96 
 
 
695 aa  216  9.999999999999999e-55  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.566522 
 
 
-
 
NC_010505  Mrad2831_0496  methyl-accepting chemotaxis sensory transducer  43.23 
 
 
838 aa  215  1.9999999999999998e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.421547 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  40.49 
 
 
711 aa  215  1.9999999999999998e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
565 aa  216  1.9999999999999998e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.18 
 
 
558 aa  215  1.9999999999999998e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
561 aa  214  2.9999999999999995e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
563 aa  215  2.9999999999999995e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  40.38 
 
 
563 aa  215  2.9999999999999995e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
562 aa  214  3.9999999999999995e-54  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  42.08 
 
 
562 aa  214  4.9999999999999996e-54  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
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