| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2961 |
|---|
| Symbol | |
|---|
| ID | 5155103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3082596 |
|---|
| End bp | 3084281 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557838 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238992 |
|---|
| Protein GI | 148254407 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.638324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCT ACGCGATCTT TGCGCTGTTC GCCCTGTTGA CGGCCGCGAT CACCTGGCTG
TCCGACTACA ATTCGCGGCG CGGCGCCGAG CTGACCAAGG CAATCGAGAC GGCCAATCTC
GCGGCGCTCA ACGTCCAGCT GGTCAACGGC CTCGTCTACG CCGTCGTGAT GGAGTCGCGC
GGCGTCTACA TGTCGACCGA CCCCGCGGTG GTGAAGCGCT ACGGCGACGG GTTGCTCAAG
TTCAATGCCG AGATCCTCAA GGTCGTCGAC AAGTGGCAGG CGATCGTGCA GGCCGACGAC
GCGCAACAAT TTGCGACCTT CAAGAAGCGC ATCGAGCAGT TCGTCGATTT TCGCAAGGAG
CTGGTGCGGC GCGCCATCGA GATCAGTCCT GCCGCGGGGC GCGAATGGGG CGACAATGAC
GCCAACCGAT CGGTTCGCTC GGCGCTCAAC AAGGATCTCG ACGAGCTGTC GAAAGTCTAT
CTGGAACGCG GCCGCAGGAT CAGCGAGGAC ACCGAGACCA ATCGCCGGCT GTCGCTGGTC
CTGACAGGCC TGGGCGGGGT GATGCTGCTG CTCGTCGCCG CCGGCGTCGT GATCATCGCC
CGGTCAGTCG CCCGGCCGCT GTCGCAGATC ACCGATACCA TTCGTCAAGT CGCGACCGGT
GCCGAGAATG TCGAGGTGCC GCATGCCTCC AGGGCCGACG AAATCGGCGA GCTCGCGCGC
GCCATCGGCG TTTTCCAACA GGCGATGGCT CACAACCGCG ACCTCAACAA CCAAGTTTCG
CAGGATTCGG AGATTCGCGA GGCCCGCGCG CGCCATATCG AAGCGGCCGT CGAAGACTTT
CGCACGGCGA TCAGCGGCGT GATGCGGACC GTCACCGAGA ACGCCGCCGC GATGCGCAGC
ACTGCCGAGA CGATCACGCG GCTGACGGCG GACGCCAACG AGCGCGCCAC CACCGCGGCC
GGCGCCACAA CGCAAGCCTC GACCAACGTC TCCGCCGTCG CGAGCGCGGC CGAGGAGCTT
TCCGCGTCCG TCGAAGAGAT TGGCCGCCAG ATCCGGCAGT CCGCCGGCGC CGTGGAGCAG
ACCGGCCAGC GCACCGAGAA GTCGATCACC GAGATCGAGG GCCTGGCCGC CGCCACCCAG
CGCATCGACG GCGTGCTGAC GCTGATCCAG ACCATCGCCG AACAGACCAA TCTGCTGGCG
CTCAACGCGA CCATCGAGGC GGCGCGAGCG GGCGACGCAG GACGGGGCTT TGCCGTGGTC
GCGCATGAGG TCAAGGCGTT GGCGGGGCAG ACCGCCAAGG CCACGGAGGA GATCAGCGAG
AATGTGGCAC TGATCCAGTC TTCGACCAAG ACCGCGGTCG ACGCGGTCCG GGAGATCGGC
GATGCCGTGC GCGGCATCAA CGAGATCACC TCCAACATCT CCAATGCCAT CCAGCAGCAG
GATCAGGCGA CGCGCGAGAT CTCGGTCAAT GCGCAATCGA CCGCGCATGG CAATCAGACG
CTGGTCATGA ACATCGGCTC GCTGCGTGAT GCGATCGGGG AAACCTCGAC TGCCGCGGCT
TCCGTGCTAT CAGCCTCCGG CGATCTCAAC TCGACCGCAC AGACGCTCGC CCAGGAGGTC
GAGAGGTTCT TCCAGAACCT CCGCTCCGGC CCGTCCACAG TCCCGACGCT GCGGCGGGCG
TCCTGA
|
|---|
| Protein sequence | MKLYAIFALF ALLTAAITWL SDYNSRRGAE LTKAIETANL AALNVQLVNG LVYAVVMESR
GVYMSTDPAV VKRYGDGLLK FNAEILKVVD KWQAIVQADD AQQFATFKKR IEQFVDFRKE
LVRRAIEISP AAGREWGDND ANRSVRSALN KDLDELSKVY LERGRRISED TETNRRLSLV
LTGLGGVMLL LVAAGVVIIA RSVARPLSQI TDTIRQVATG AENVEVPHAS RADEIGELAR
AIGVFQQAMA HNRDLNNQVS QDSEIREARA RHIEAAVEDF RTAISGVMRT VTENAAAMRS
TAETITRLTA DANERATTAA GATTQASTNV SAVASAAEEL SASVEEIGRQ IRQSAGAVEQ
TGQRTEKSIT EIEGLAAATQ RIDGVLTLIQ TIAEQTNLLA LNATIEAARA GDAGRGFAVV
AHEVKALAGQ TAKATEEISE NVALIQSSTK TAVDAVREIG DAVRGINEIT SNISNAIQQQ
DQATREISVN AQSTAHGNQT LVMNIGSLRD AIGETSTAAA SVLSASGDLN STAQTLAQEV
ERFFQNLRSG PSTVPTLRRA S
|
|---|
| |