More than 300 homologs were found in PanDaTox collection
for query gene Sde_1389 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_1389  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
219 aa  438  9.999999999999999e-123  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  46.8 
 
 
552 aa  157  1e-37  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  47.26 
 
 
564 aa  156  2e-37  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  47.03 
 
 
674 aa  155  3e-37  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  45.27 
 
 
548 aa  152  4e-36  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
552 aa  152  5e-36  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  45.77 
 
 
630 aa  149  3e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  47.09 
 
 
623 aa  149  3e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44.06 
 
 
679 aa  149  3e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  46.04 
 
 
547 aa  148  5e-35  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
533 aa  148  5e-35  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  44.6 
 
 
632 aa  148  6e-35  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
572 aa  147  1.0000000000000001e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  45.15 
 
 
624 aa  147  1.0000000000000001e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
645 aa  146  2.0000000000000003e-34  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
645 aa  147  2.0000000000000003e-34  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
543 aa  146  3e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
544 aa  145  3e-34  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
541 aa  145  5e-34  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.86 
 
 
623 aa  145  6e-34  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  45 
 
 
771 aa  145  7.0000000000000006e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  41.58 
 
 
557 aa  144  7.0000000000000006e-34  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
658 aa  145  7.0000000000000006e-34  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  45.59 
 
 
630 aa  144  8.000000000000001e-34  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
533 aa  144  9e-34  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
620 aa  144  9e-34  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  45.59 
 
 
630 aa  144  9e-34  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
620 aa  144  9e-34  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
620 aa  144  9e-34  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  44.5 
 
 
622 aa  144  1e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  45.59 
 
 
630 aa  144  1e-33  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  44.39 
 
 
739 aa  144  1e-33  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  44.55 
 
 
628 aa  143  2e-33  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  43.78 
 
 
559 aa  143  2e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
645 aa  142  3e-33  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
647 aa  142  3e-33  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
620 aa  142  3e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  43.56 
 
 
637 aa  142  3e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  41.58 
 
 
645 aa  142  3e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
645 aa  142  3e-33  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  43.56 
 
 
628 aa  142  4e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.08 
 
 
647 aa  142  5e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  43.78 
 
 
533 aa  142  5e-33  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  41.35 
 
 
558 aa  142  5e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  43.78 
 
 
541 aa  142  5e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009665  Shew185_4113  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
527 aa  141  6e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.78 
 
 
533 aa  141  6e-33  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
620 aa  142  6e-33  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
527 aa  141  7e-33  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
544 aa  141  7e-33  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  45.15 
 
 
623 aa  141  7e-33  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  43.78 
 
 
553 aa  141  9e-33  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  42.79 
 
 
554 aa  141  9e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
525 aa  141  9e-33  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
636 aa  141  9e-33  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  45.1 
 
 
630 aa  141  9e-33  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  41.79 
 
 
633 aa  140  9.999999999999999e-33  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  44 
 
 
664 aa  140  9.999999999999999e-33  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
543 aa  140  9.999999999999999e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
636 aa  140  9.999999999999999e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  40.55 
 
 
641 aa  140  1.9999999999999998e-32  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
664 aa  140  1.9999999999999998e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
631 aa  140  1.9999999999999998e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  42.79 
 
 
554 aa  140  1.9999999999999998e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  42.29 
 
 
536 aa  140  1.9999999999999998e-32  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_013456  VEA_002443  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  40.91 
 
 
541 aa  140  1.9999999999999998e-32  Vibrio sp. Ex25  Bacteria  unclonable  0.00000057049  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  42.08 
 
 
643 aa  139  3e-32  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
554 aa  139  3e-32  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  43.5 
 
 
664 aa  139  3e-32  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
620 aa  139  3e-32  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  42.79 
 
 
575 aa  139  3e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
647 aa  139  3e-32  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  43.5 
 
 
664 aa  139  3e-32  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  40.54 
 
 
485 aa  139  3.9999999999999997e-32  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.29 
 
 
554 aa  139  3.9999999999999997e-32  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  42.79 
 
 
527 aa  139  3.9999999999999997e-32  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
554 aa  139  3.9999999999999997e-32  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
554 aa  139  3.9999999999999997e-32  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
555 aa  139  4.999999999999999e-32  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  45.1 
 
 
411 aa  139  4.999999999999999e-32  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  40.69 
 
 
433 aa  138  6e-32  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
544 aa  138  7e-32  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
544 aa  138  7e-32  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  43.07 
 
 
628 aa  138  7e-32  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2309  methyl-accepting chemotaxis protein-like protein  43.28 
 
 
547 aa  138  7e-32  Shewanella sediminis HAW-EB3  Bacteria  normal  0.037772  hitchhiker  0.0000415162 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
630 aa  138  7.999999999999999e-32  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_007492  Pfl01_4192  chemotaxis sensory transducer  44.39 
 
 
654 aa  138  7.999999999999999e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
630 aa  138  7.999999999999999e-32  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
630 aa  137  8.999999999999999e-32  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  43.07 
 
 
690 aa  137  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.61 
 
 
630 aa  137  1e-31  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  40.59 
 
 
646 aa  137  1e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  43.56 
 
 
681 aa  137  1e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_007492  Pfl01_0789  chemotaxis sensory transducer  43.2 
 
 
676 aa  137  1e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.377611  normal  0.0840542 
 
 
-
 
NC_007492  Pfl01_2554  chemotaxis sensory transducer  43 
 
 
663 aa  137  1e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.486048 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
664 aa  137  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  43.56 
 
 
695 aa  137  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
620 aa  137  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  42.79 
 
 
561 aa  136  2e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  43.28 
 
 
553 aa  136  2e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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