More than 300 homologs were found in PanDaTox collection
for query gene Reut_A1901 on replicon NC_007347
Organism: Ralstonia eutropha JMP134



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  530  1e-149  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  77.22 
 
 
266 aa  402  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  76.74 
 
 
266 aa  399  9.999999999999999e-111  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  75.58 
 
 
281 aa  394  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  75.19 
 
 
266 aa  396  1e-109  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  75.58 
 
 
281 aa  394  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  76.36 
 
 
266 aa  392  1e-108  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  74.81 
 
 
266 aa  392  1e-108  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  75.19 
 
 
266 aa  391  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  68.36 
 
 
265 aa  363  2e-99  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  67.05 
 
 
265 aa  354  5.999999999999999e-97  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  66.92 
 
 
271 aa  345  4e-94  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  65.02 
 
 
271 aa  337  9.999999999999999e-92  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  65.12 
 
 
265 aa  330  1e-89  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  61.6 
 
 
270 aa  315  7e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  61 
 
 
270 aa  311  6.999999999999999e-84  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  61.98 
 
 
270 aa  307  1.0000000000000001e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  67.19 
 
 
269 aa  302  3.0000000000000004e-81  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  59.46 
 
 
285 aa  302  4.0000000000000003e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  60.55 
 
 
264 aa  301  8.000000000000001e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  62.89 
 
 
266 aa  300  1e-80  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  59.62 
 
 
269 aa  295  5e-79  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  58.2 
 
 
269 aa  295  6e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  59.38 
 
 
269 aa  293  2e-78  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  62.11 
 
 
263 aa  291  1e-77  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  57.74 
 
 
265 aa  287  1e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  58.17 
 
 
270 aa  286  2e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  57.74 
 
 
265 aa  286  2.9999999999999996e-76  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  61 
 
 
271 aa  279  3e-74  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  55.47 
 
 
265 aa  279  3e-74  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  60.16 
 
 
262 aa  279  3e-74  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  59.77 
 
 
262 aa  279  4e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  52.55 
 
 
261 aa  259  4e-68  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  52.85 
 
 
264 aa  257  1e-67  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  53.73 
 
 
264 aa  251  8.000000000000001e-66  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  53.33 
 
 
264 aa  251  1e-65  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  51.37 
 
 
260 aa  249  2e-65  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  51.76 
 
 
260 aa  249  2e-65  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  53.61 
 
 
264 aa  249  5e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  52.94 
 
 
262 aa  248  1e-64  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  52.55 
 
 
262 aa  246  2e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  52.9 
 
 
267 aa  247  2e-64  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  49.81 
 
 
260 aa  245  4e-64  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  50.59 
 
 
262 aa  243  3e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  52.16 
 
 
262 aa  241  1e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  62.56 
 
 
199 aa  239  4e-62  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  51.36 
 
 
269 aa  238  6.999999999999999e-62  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  48.85 
 
 
266 aa  237  2e-61  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  46.24 
 
 
266 aa  236  3e-61  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  48.65 
 
 
262 aa  234  9e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  45.59 
 
 
264 aa  229  4e-59  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  51.37 
 
 
287 aa  229  4e-59  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  49.21 
 
 
266 aa  228  8e-59  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  46.56 
 
 
266 aa  225  5.0000000000000005e-58  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  47.06 
 
 
257 aa  215  5.9999999999999996e-55  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  50 
 
 
262 aa  213  3.9999999999999995e-54  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  45.17 
 
 
267 aa  206  4e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  45.28 
 
 
269 aa  204  1e-51  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  46.77 
 
 
268 aa  197  1.0000000000000001e-49  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  44.36 
 
 
263 aa  194  2e-48  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  51.92 
 
 
264 aa  182  5.0000000000000004e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  41.39 
 
 
283 aa  167  2e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  45.33 
 
 
253 aa  161  9e-39  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  49.46 
 
 
258 aa  160  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  43.29 
 
 
266 aa  158  1e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  41.59 
 
 
296 aa  153  2.9999999999999998e-36  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  40.27 
 
 
262 aa  152  5.9999999999999996e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  41.99 
 
 
266 aa  150  1e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  40.69 
 
 
269 aa  150  2e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  44.69 
 
 
255 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  44.04 
 
 
261 aa  149  4e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  43.52 
 
 
261 aa  148  8e-35  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  40.56 
 
 
253 aa  147  1.0000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  38.94 
 
 
250 aa  147  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  42.04 
 
 
267 aa  146  4.0000000000000006e-34  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  37.95 
 
 
255 aa  145  9e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  39.46 
 
 
269 aa  144  1e-33  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  41.67 
 
 
269 aa  144  1e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  41.28 
 
 
271 aa  144  2e-33  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.24 
 
 
252 aa  143  3e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  42.6 
 
 
249 aa  142  7e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  37.59 
 
 
259 aa  141  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  38.43 
 
 
262 aa  140  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  40.59 
 
 
259 aa  140  1.9999999999999998e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  43.09 
 
 
258 aa  140  3e-32  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.96 
 
 
258 aa  139  6e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  41.45 
 
 
264 aa  139  7e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  45.45 
 
 
264 aa  137  1e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  40.34 
 
 
262 aa  137  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  40.61 
 
 
259 aa  135  5e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  39.21 
 
 
269 aa  134  9.999999999999999e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  38.33 
 
 
249 aa  134  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  40.35 
 
 
254 aa  133  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  39.04 
 
 
255 aa  133  3e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  41.41 
 
 
250 aa  133  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  40.51 
 
 
264 aa  132  6e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  44.44 
 
 
273 aa  132  7.999999999999999e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  40.43 
 
 
258 aa  131  1.0000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  39.38 
 
 
260 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  44.44 
 
 
291 aa  130  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
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