More than 300 homologs were found in PanDaTox collection
for query gene Pecwa_2365 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  100 
 
 
257 aa  514  1.0000000000000001e-145  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  51.57 
 
 
260 aa  261  8.999999999999999e-69  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  51.76 
 
 
262 aa  259  4e-68  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  51.38 
 
 
264 aa  259  4e-68  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  51.76 
 
 
262 aa  258  6e-68  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  50.99 
 
 
264 aa  257  1e-67  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  51.37 
 
 
261 aa  256  4e-67  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  52.17 
 
 
262 aa  253  2.0000000000000002e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  51.97 
 
 
265 aa  251  7e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  54.51 
 
 
264 aa  249  3e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  52.55 
 
 
264 aa  248  7e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  49.21 
 
 
262 aa  248  7e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  50 
 
 
260 aa  248  7e-65  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  50.2 
 
 
262 aa  247  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  50.79 
 
 
265 aa  247  2e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  50.59 
 
 
267 aa  246  2e-64  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  50.58 
 
 
260 aa  245  6e-64  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  49.22 
 
 
287 aa  242  3.9999999999999997e-63  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  50.98 
 
 
262 aa  241  7.999999999999999e-63  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  49.61 
 
 
269 aa  229  3e-59  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  46.3 
 
 
265 aa  225  4e-58  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  44.75 
 
 
271 aa  219  5e-56  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  48.43 
 
 
271 aa  215  5e-55  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  44.75 
 
 
270 aa  214  9.999999999999999e-55  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  45.74 
 
 
266 aa  214  9.999999999999999e-55  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  44.14 
 
 
270 aa  211  1e-53  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  45.49 
 
 
264 aa  209  5e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  45.1 
 
 
264 aa  207  2e-52  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  44.53 
 
 
270 aa  206  3e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  44.92 
 
 
281 aa  206  3e-52  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  44.92 
 
 
281 aa  206  3e-52  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  45.31 
 
 
266 aa  206  4e-52  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  44.92 
 
 
266 aa  205  5e-52  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  44.53 
 
 
266 aa  205  5e-52  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  47.06 
 
 
266 aa  205  6e-52  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  44.53 
 
 
266 aa  205  8e-52  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  44.53 
 
 
266 aa  204  1e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  43.19 
 
 
267 aa  199  3.9999999999999996e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  44.14 
 
 
265 aa  199  5e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  46.27 
 
 
262 aa  196  3e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  45.88 
 
 
262 aa  194  1e-48  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  43.75 
 
 
266 aa  194  2e-48  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  45.49 
 
 
263 aa  192  4e-48  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  45.88 
 
 
271 aa  192  6e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  43.53 
 
 
269 aa  190  2e-47  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  41.96 
 
 
269 aa  187  1e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  41.9 
 
 
285 aa  187  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  41.41 
 
 
265 aa  187  2e-46  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  42.58 
 
 
265 aa  185  5e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  41.73 
 
 
266 aa  183  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  40.62 
 
 
269 aa  181  1e-44  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  43.97 
 
 
269 aa  179  4.999999999999999e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  40.78 
 
 
266 aa  173  1.9999999999999998e-42  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  40.94 
 
 
266 aa  173  2.9999999999999996e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  41.9 
 
 
270 aa  172  5e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  40.55 
 
 
266 aa  172  6.999999999999999e-42  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  47.45 
 
 
264 aa  170  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  41.25 
 
 
263 aa  168  6e-41  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  40.97 
 
 
296 aa  165  5.9999999999999996e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  38.19 
 
 
269 aa  163  2.0000000000000002e-39  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  39.84 
 
 
268 aa  161  8.000000000000001e-39  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  43.17 
 
 
255 aa  161  9e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  38.89 
 
 
283 aa  159  3e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  40.71 
 
 
250 aa  158  7e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  40.62 
 
 
259 aa  158  7e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  41.26 
 
 
269 aa  156  2e-37  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  39.65 
 
 
258 aa  156  3e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  38.5 
 
 
252 aa  155  5.0000000000000005e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  40.81 
 
 
269 aa  154  1e-36  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  41.48 
 
 
249 aa  154  1e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  40.89 
 
 
253 aa  153  2.9999999999999998e-36  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  46.2 
 
 
258 aa  152  4e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  39.82 
 
 
258 aa  151  8e-36  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  40.71 
 
 
263 aa  150  2e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  38.86 
 
 
282 aa  150  2e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  38.33 
 
 
276 aa  149  3e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  41.41 
 
 
269 aa  147  1.0000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  41.41 
 
 
251 aa  147  1.0000000000000001e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  38.33 
 
 
249 aa  147  2.0000000000000003e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  39.38 
 
 
199 aa  146  3e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.89 
 
 
255 aa  146  4.0000000000000006e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  37.25 
 
 
269 aa  145  6e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  40.97 
 
 
266 aa  145  8.000000000000001e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  38.57 
 
 
271 aa  144  2e-33  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  40.35 
 
 
250 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  39.73 
 
 
258 aa  144  2e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  39.73 
 
 
258 aa  142  4e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  39.73 
 
 
258 aa  142  4e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  35.78 
 
 
255 aa  142  5e-33  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.65 
 
 
266 aa  141  9.999999999999999e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  38.57 
 
 
258 aa  140  1.9999999999999998e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  44.62 
 
 
267 aa  139  3e-32  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  41.96 
 
 
276 aa  139  3.9999999999999997e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  31.72 
 
 
265 aa  139  3.9999999999999997e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  43.62 
 
 
267 aa  139  3.9999999999999997e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  37.39 
 
 
260 aa  137  1e-31  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  31.72 
 
 
265 aa  137  1e-31  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  36.12 
 
 
262 aa  137  2e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  37.7 
 
 
263 aa  136  4e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  43.32 
 
 
255 aa  135  6.0000000000000005e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
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