More than 300 homologs were found in PanDaTox collection
for query gene Sked_35320 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  100 
 
 
249 aa  483  1e-136  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  70.68 
 
 
255 aa  328  5.0000000000000004e-89  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  68.57 
 
 
269 aa  327  2.0000000000000001e-88  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  65.06 
 
 
269 aa  321  5e-87  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  66.67 
 
 
259 aa  314  9.999999999999999e-85  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  57.96 
 
 
282 aa  270  2e-71  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  52.74 
 
 
253 aa  229  3e-59  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  52.07 
 
 
296 aa  221  6e-57  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  49.38 
 
 
254 aa  216  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  53.47 
 
 
276 aa  214  9.999999999999999e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  50.6 
 
 
287 aa  207  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  47.3 
 
 
249 aa  207  2e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  51.03 
 
 
258 aa  203  2e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  49.4 
 
 
259 aa  202  5e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  48.33 
 
 
250 aa  198  5e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  46.47 
 
 
252 aa  197  1.0000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  46.41 
 
 
263 aa  193  2e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  51.67 
 
 
250 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  46.53 
 
 
269 aa  190  2e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  45.15 
 
 
258 aa  188  5e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  46.53 
 
 
269 aa  188  5.999999999999999e-47  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  48.97 
 
 
253 aa  186  2e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  47.54 
 
 
258 aa  185  6e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  45.22 
 
 
251 aa  185  6e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  41.43 
 
 
258 aa  180  2e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  46.5 
 
 
258 aa  179  4e-44  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  46.5 
 
 
258 aa  179  4e-44  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  47.11 
 
 
259 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  46.09 
 
 
258 aa  177  1e-43  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  45.49 
 
 
258 aa  172  2.9999999999999996e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  45.22 
 
 
258 aa  163  2.0000000000000002e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  44.49 
 
 
264 aa  160  2e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  43.42 
 
 
264 aa  158  1e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  40.17 
 
 
265 aa  157  2e-37  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.48 
 
 
257 aa  154  1e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  43.39 
 
 
266 aa  154  2e-36  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  31.56 
 
 
265 aa  148  7e-35  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  42.29 
 
 
265 aa  147  2.0000000000000003e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  36.07 
 
 
264 aa  147  2.0000000000000003e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  31.56 
 
 
265 aa  147  2.0000000000000003e-34  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  40.87 
 
 
265 aa  145  5e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  35.51 
 
 
263 aa  145  7.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  39.21 
 
 
270 aa  144  2e-33  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  38.77 
 
 
270 aa  142  4e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  39.67 
 
 
267 aa  140  3e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  38.33 
 
 
266 aa  139  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  38.33 
 
 
265 aa  139  6e-32  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  37.55 
 
 
266 aa  137  2e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  38.33 
 
 
266 aa  137  2e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  38.8 
 
 
263 aa  137  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  38.33 
 
 
266 aa  136  4e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  39.65 
 
 
267 aa  135  5e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  40.23 
 
 
271 aa  135  6.0000000000000005e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  38.33 
 
 
265 aa  135  9e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  40.35 
 
 
266 aa  133  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  38.33 
 
 
266 aa  133  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  32.68 
 
 
260 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  37.44 
 
 
281 aa  132  3.9999999999999996e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  37.44 
 
 
281 aa  132  3.9999999999999996e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  37 
 
 
264 aa  132  3.9999999999999996e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  38.8 
 
 
262 aa  132  6e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  37.96 
 
 
259 aa  132  6e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  37.44 
 
 
266 aa  131  9e-30  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  36.29 
 
 
272 aa  131  1.0000000000000001e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  37 
 
 
267 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  37.01 
 
 
266 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  38.5 
 
 
271 aa  130  3e-29  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  30.86 
 
 
260 aa  130  3e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  37.44 
 
 
266 aa  129  5.0000000000000004e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  37.89 
 
 
270 aa  128  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  36.18 
 
 
271 aa  128  9.000000000000001e-29  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  33.73 
 
 
262 aa  128  9.000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  36.07 
 
 
266 aa  127  1.0000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  35.92 
 
 
259 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.33 
 
 
262 aa  127  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  36.33 
 
 
262 aa  127  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  33.06 
 
 
267 aa  127  1.0000000000000001e-28  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  38.16 
 
 
264 aa  127  2.0000000000000002e-28  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  36.84 
 
 
273 aa  127  2.0000000000000002e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  37.72 
 
 
263 aa  127  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  40.86 
 
 
259 aa  127  2.0000000000000002e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  36.33 
 
 
262 aa  127  2.0000000000000002e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  34.43 
 
 
267 aa  126  3e-28  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.44 
 
 
261 aa  126  3e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  36.4 
 
 
262 aa  126  3e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  37.12 
 
 
262 aa  125  4.0000000000000003e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  33.19 
 
 
256 aa  125  6e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  36.33 
 
 
259 aa  125  6e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  33.99 
 
 
256 aa  125  6e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  37.28 
 
 
266 aa  125  7e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  35.16 
 
 
264 aa  125  7e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  36.84 
 
 
262 aa  125  8.000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  39.65 
 
 
255 aa  125  8.000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  36.4 
 
 
260 aa  125  9e-28  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  38.55 
 
 
277 aa  124  1e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  36.4 
 
 
266 aa  124  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  37.11 
 
 
257 aa  124  2e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  36.68 
 
 
262 aa  123  3e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  36.92 
 
 
261 aa  123  3e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  36.92 
 
 
269 aa  123  3e-27  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
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