Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5185 |
Symbol | |
ID | 6978279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 817374 |
End bp | 818231 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643394308 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002279126 |
Protein GI | 209547208 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTT CATCAAAAGG CATCGCCGTC ATTACCGGCG CTTCTACCGG TATTGGAGCA ATCTACGCCG ACCGACTGGC TCGCCGCGGC TACGACCTCA TTCTCGTGGC TCGCAGTCAA AGCAAATTGG ACGACGTAGC CCGGCGGGTC TCTGACGTGA CCGATCGCAA CGTCCAGACC GTCACAGCCG ACCTCAACAA CAAGCTGGAC CTGAAGCGCA TCGAAACGCT TTTGGCAAAG GATGCCGGCA TCACCATGCT GGTCAACAAT GCTGGCGTCG GAGGATTGGT GTCTCTGCTT GAGTCGAACG TCGACGAGAT GGAAGCGATG ATCGACCTAA ATGTCACCGC GCTGACGCGA CTCACCTATG CGATGATCCC TGCGTTTGTC ACACGCGGCG GCGGCACGAT CATCAACATC TCCTCGGCTG TCGCCGTCGC ACCGGAAATC CTCAACGGCG TCTACGGCGG CACGAAGGCC TTTGTGTTGG CGTTCAGCCT GTCGCTCCAC AAGGAGCTCG CGGACAGGAA CATCCGCATC CAGGCCGTCC TGCCCGGCGC CACCGCGACG AATTTTTGGG ATGCGGCGGG CGGCTCGGTA GAGCAGTTGC CGAGTAAAAT GGTCATGCGT GGAGACGACC TCATCGACGC CGCCCTTACC GGACTTGATC AAGGCGAACT CGTCACCATC CCCTCGCTGC CCGAAAAAGC CGACTGGGAC GCCTATGAAG CCGCACGGCA GAAGCTCATC CCCAATCTTT CCCTCAGCAC TCCGGCTGCT CGCTTGCGTG CTGCCATTGT CGCCCAACGC ACTCAACCGT CAAACCAAGG AGATAGACAT GAACATCGTC ACCAATAG
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Protein sequence | MTTSSKGIAV ITGASTGIGA IYADRLARRG YDLILVARSQ SKLDDVARRV SDVTDRNVQT VTADLNNKLD LKRIETLLAK DAGITMLVNN AGVGGLVSLL ESNVDEMEAM IDLNVTALTR LTYAMIPAFV TRGGGTIINI SSAVAVAPEI LNGVYGGTKA FVLAFSLSLH KELADRNIRI QAVLPGATAT NFWDAAGGSV EQLPSKMVMR GDDLIDAALT GLDQGELVTI PSLPEKADWD AYEAARQKLI PNLSLSTPAA RLRAAIVAQR TQPSNQGDRH EHRHQ
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