Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0129 |
Symbol | |
ID | 5706735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 142113 |
End bp | 142922 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641269655 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001535055 |
Protein GI | 159035802 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000288771 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCCTTCG ACCAGCCGGC CACTGAGCGG CGTGCCCTGA TCACCGGTGC GACGGCCGGC ATTGGTGCGG AGTTCGCCCG CCAACTCGCA GCGGACGGCT GGCACCTGGT GCTGGTCGCC CGGGACGCCA CCCGGTTGAC CGAGTCCGCG GCGGAACTGA CCTCCCGGCA TGGCCGGAAG GTGGAGACGA TTTCCGCGGA CCTGTCCACC GACGAGGGAT GCACGGAGGT GGAGCGCCGA CTCGCCGGCG GCTCCCCGGT CGGGTTGGTG GTGAACAACG CCGGGGTCAG TCTCAACACG CCGTTCCTCA CGTCGTCGCC AGAGGACGAG GCCCGCCTGC TGCGGCTCAA CGTGCACGCG GTGATGCGGC TGACTCTCGC CGCCGTCCAG TCGATGGTTG AGCGGCGGAG CGGGGCAGTG ATAAATGTCT CTTCGGTGTC CGGGTTCGGG CCGGTCATGC CCGGTTCGAC GTATCCGGCC AGCAAGGCGT GGGTCACCAG CTTCAGTGAG TCGGTCGGGC TCTCCGCGCG TGACTTCGGC GTCCGGGTGA TGGCCCTCTG CCCGGGCTAC ACGCGAACGG AATACCACGA CCGGGCCGGC ATCGACACAT CGAAGACGCC GGGCTGGATG TGGCTGCGGG CTGACGAAGT CGTCACTGGT GCCCTCCGTG ACCTGCGAAA AGGCAAGCTG GTCAGCGTTC CAGTGTGGAA GTACAAGCTG ATGGTGGCGG GGCTGCGGCA CGCGCCCCGA CGATTGGTGG AGGCTTTCTC ACAGGACACG CGCGGCCGGG TGAGCCCCGA GCAGCGGTGA
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Protein sequence | MPFDQPATER RALITGATAG IGAEFARQLA ADGWHLVLVA RDATRLTESA AELTSRHGRK VETISADLST DEGCTEVERR LAGGSPVGLV VNNAGVSLNT PFLTSSPEDE ARLLRLNVHA VMRLTLAAVQ SMVERRSGAV INVSSVSGFG PVMPGSTYPA SKAWVTSFSE SVGLSARDFG VRVMALCPGY TRTEYHDRAG IDTSKTPGWM WLRADEVVTG ALRDLRKGKL VSVPVWKYKL MVAGLRHAPR RLVEAFSQDT RGRVSPEQR
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