Gene Sare_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0129 
Symbol 
ID5706735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp142113 
End bp142922 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID641269655 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001535055 
Protein GI159035802 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000288771 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCCTTCG ACCAGCCGGC CACTGAGCGG CGTGCCCTGA TCACCGGTGC GACGGCCGGC 
ATTGGTGCGG AGTTCGCCCG CCAACTCGCA GCGGACGGCT GGCACCTGGT GCTGGTCGCC
CGGGACGCCA CCCGGTTGAC CGAGTCCGCG GCGGAACTGA CCTCCCGGCA TGGCCGGAAG
GTGGAGACGA TTTCCGCGGA CCTGTCCACC GACGAGGGAT GCACGGAGGT GGAGCGCCGA
CTCGCCGGCG GCTCCCCGGT CGGGTTGGTG GTGAACAACG CCGGGGTCAG TCTCAACACG
CCGTTCCTCA CGTCGTCGCC AGAGGACGAG GCCCGCCTGC TGCGGCTCAA CGTGCACGCG
GTGATGCGGC TGACTCTCGC CGCCGTCCAG TCGATGGTTG AGCGGCGGAG CGGGGCAGTG
ATAAATGTCT CTTCGGTGTC CGGGTTCGGG CCGGTCATGC CCGGTTCGAC GTATCCGGCC
AGCAAGGCGT GGGTCACCAG CTTCAGTGAG TCGGTCGGGC TCTCCGCGCG TGACTTCGGC
GTCCGGGTGA TGGCCCTCTG CCCGGGCTAC ACGCGAACGG AATACCACGA CCGGGCCGGC
ATCGACACAT CGAAGACGCC GGGCTGGATG TGGCTGCGGG CTGACGAAGT CGTCACTGGT
GCCCTCCGTG ACCTGCGAAA AGGCAAGCTG GTCAGCGTTC CAGTGTGGAA GTACAAGCTG
ATGGTGGCGG GGCTGCGGCA CGCGCCCCGA CGATTGGTGG AGGCTTTCTC ACAGGACACG
CGCGGCCGGG TGAGCCCCGA GCAGCGGTGA
 
Protein sequence
MPFDQPATER RALITGATAG IGAEFARQLA ADGWHLVLVA RDATRLTESA AELTSRHGRK 
VETISADLST DEGCTEVERR LAGGSPVGLV VNNAGVSLNT PFLTSSPEDE ARLLRLNVHA
VMRLTLAAVQ SMVERRSGAV INVSSVSGFG PVMPGSTYPA SKAWVTSFSE SVGLSARDFG
VRVMALCPGY TRTEYHDRAG IDTSKTPGWM WLRADEVVTG ALRDLRKGKL VSVPVWKYKL
MVAGLRHAPR RLVEAFSQDT RGRVSPEQR