| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2426 |
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| Symbol | |
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| ID | 8381579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2599997 |
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| End bp | 2600806 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645005190 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003162361 |
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| Protein GI | 256833634 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.316114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAG CACTGATCAC TGGAGCAACA GCAGGCATTG GGTTGGAATT TGCGTGGCAA
CTGGCTGCGA GTCGCCACAA CCTTGTCCTG GTGGCACGCG ATGCCCACCG GCTTGATGCG
GTCGCCCAGC AACTGAACTC GGTTGCGGGT GTTCATGTTG ACGTGCTCCC CGCTGACTTG
GGGACACGCG AGGGGATCGA CTCGGTTGTG CAGCGGCTCA GTGACCGGGA CCGCCCCATT
AACCTTCTGG TCAACAACGC TGGGTATGCC ATCAACACTC GGTTCCTGGA TTCTGAGATT
GACGACCAAG CCGAGGCGTT GACGGTCATG GTGGAGGCGG TCATGCGGTT ATCGCATGCC
GCAGCCAAGG TCATGCGCCA ACGGGGACGA GGGCTCATTA TCAATGTGTC CTCGGTCGCC
GCGCTCACCG CATCAGGCAC CTACTCGGCG CATAAAGCGT GGGTGCGGTC CTTCACCGAA
GGACTTGCTG TGGAATTGTC AGGAACGGGG GCATCCGCGA TGGCGTTGTG CCCTGGGTTT
GTGCACACTG AGTTCCACGA ACGTGCAGGC ATTGACTATT CGGGGTTCCC CGAGGTTGCG
TGGCTGTCAG CGGAGGAACT TGTCCGTGAA GCTCTGGCCG ATGCGCGCCG TGGTGCGGTC
CTTTCAACCC CGTCACTGCG GTACAAGGGA GCATCTGGCT TGTTGCGTAT TTTGCCGCGG
TTTGTTGTGC GGGCATTGCA AGTGCGTGGC GCAGTGGCCA GCACGGCAGC TGGACGCCGC
AATCCGATCA CCACGCCAAG CCAGACCTAA
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| Protein sequence | MATALITGAT AGIGLEFAWQ LAASRHNLVL VARDAHRLDA VAQQLNSVAG VHVDVLPADL
GTREGIDSVV QRLSDRDRPI NLLVNNAGYA INTRFLDSEI DDQAEALTVM VEAVMRLSHA
AAKVMRQRGR GLIINVSSVA ALTASGTYSA HKAWVRSFTE GLAVELSGTG ASAMALCPGF
VHTEFHERAG IDYSGFPEVA WLSAEELVRE ALADARRGAV LSTPSLRYKG ASGLLRILPR
FVVRALQVRG AVASTAAGRR NPITTPSQT
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