Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6941 |
Symbol | |
ID | 8331161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 8069021 |
End bp | 8069800 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644947372 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003104582 |
Protein GI | 256380922 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCCC CGACCGCCCT CGTCACGGGG GCCAGCGCGG GCATCGGCGC GGCCTTCGCC CGCCGGTTGG CCGCCGAGGG GCACGACCTG GTGCTGGTGG CCAGGACCGC CGAGCGCCTG GAGGCGCTGG CCCGTGAGCT GCGCGCCAGG CACGGCGTCG AGGTCACCGC GTTCCCCGCC GACCTGTCCA CGGCCGAGGG CCGCCGCTCG GTCGAGGAGC TGCTGGAGCG CGGCGAGGTC GACCTCCTGG TCAACAACGC GGGCTTCACC AACTCCGCCG AGTTCTTCCA GGCCGGGGCG GACCAGCTGG AGGCCCAGCT CGACGTCAAC GTCACCAGCG TCCTGCGGCT GACCCGCGCG GCGCTGCCCG GCATGGTCGC CCGCCGCTCC GGCGCGGTCG TCAACGTCTC CAGCGTCGCG GGCTTCCTGC CCGGCAGGGG CAGCAGCTAC AGCGCCGACA AGGCGTGGGT GACCACGTTC TCCGAGGGCA TGGCCCAGTC GACCGAGGGC ACCGGCGTGC GCGTCATGGC GCTGTGCCCC GGCTTCACCC GCACCGAGTT CCACGAGCGC GCGGGCATCG ACATGACCAA GACCCCCGAC CTGCTCTACC TGGACGCCGA CCGGGTGGTG CACGAGGCGC TGGCCGACCT GCGCGCGGGC AAGCAGGTCT CCATCCCCAG CCCGCAGTAC AAGGCGATCA TCACCGGCGC CCGCCTGCTG CCCAGGGCCG TCCTGCGCAA GATCGCCTCC AGGGTCCTCG GCGGCCGAGG CCGCACCTGA
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Protein sequence | MSAPTALVTG ASAGIGAAFA RRLAAEGHDL VLVARTAERL EALARELRAR HGVEVTAFPA DLSTAEGRRS VEELLERGEV DLLVNNAGFT NSAEFFQAGA DQLEAQLDVN VTSVLRLTRA ALPGMVARRS GAVVNVSSVA GFLPGRGSSY SADKAWVTTF SEGMAQSTEG TGVRVMALCP GFTRTEFHER AGIDMTKTPD LLYLDADRVV HEALADLRAG KQVSIPSPQY KAIITGARLL PRAVLRKIAS RVLGGRGRT
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