Gene Amir_6941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6941 
Symbol 
ID8331161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8069021 
End bp8069800 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content74% 
IMG OID644947372 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003104582 
Protein GI256380922 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCCC CGACCGCCCT CGTCACGGGG GCCAGCGCGG GCATCGGCGC GGCCTTCGCC 
CGCCGGTTGG CCGCCGAGGG GCACGACCTG GTGCTGGTGG CCAGGACCGC CGAGCGCCTG
GAGGCGCTGG CCCGTGAGCT GCGCGCCAGG CACGGCGTCG AGGTCACCGC GTTCCCCGCC
GACCTGTCCA CGGCCGAGGG CCGCCGCTCG GTCGAGGAGC TGCTGGAGCG CGGCGAGGTC
GACCTCCTGG TCAACAACGC GGGCTTCACC AACTCCGCCG AGTTCTTCCA GGCCGGGGCG
GACCAGCTGG AGGCCCAGCT CGACGTCAAC GTCACCAGCG TCCTGCGGCT GACCCGCGCG
GCGCTGCCCG GCATGGTCGC CCGCCGCTCC GGCGCGGTCG TCAACGTCTC CAGCGTCGCG
GGCTTCCTGC CCGGCAGGGG CAGCAGCTAC AGCGCCGACA AGGCGTGGGT GACCACGTTC
TCCGAGGGCA TGGCCCAGTC GACCGAGGGC ACCGGCGTGC GCGTCATGGC GCTGTGCCCC
GGCTTCACCC GCACCGAGTT CCACGAGCGC GCGGGCATCG ACATGACCAA GACCCCCGAC
CTGCTCTACC TGGACGCCGA CCGGGTGGTG CACGAGGCGC TGGCCGACCT GCGCGCGGGC
AAGCAGGTCT CCATCCCCAG CCCGCAGTAC AAGGCGATCA TCACCGGCGC CCGCCTGCTG
CCCAGGGCCG TCCTGCGCAA GATCGCCTCC AGGGTCCTCG GCGGCCGAGG CCGCACCTGA
 
Protein sequence
MSAPTALVTG ASAGIGAAFA RRLAAEGHDL VLVARTAERL EALARELRAR HGVEVTAFPA 
DLSTAEGRRS VEELLERGEV DLLVNNAGFT NSAEFFQAGA DQLEAQLDVN VTSVLRLTRA
ALPGMVARRS GAVVNVSSVA GFLPGRGSSY SADKAWVTTF SEGMAQSTEG TGVRVMALCP
GFTRTEFHER AGIDMTKTPD LLYLDADRVV HEALADLRAG KQVSIPSPQY KAIITGARLL
PRAVLRKIAS RVLGGRGRT