More than 300 homologs were found in PanDaTox collection
for query gene Ksed_05610 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  100 
 
 
296 aa  591  1e-168  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  54.07 
 
 
269 aa  241  9e-63  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  55.2 
 
 
255 aa  231  1e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  53.5 
 
 
269 aa  224  2e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  52.07 
 
 
249 aa  221  9.999999999999999e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  53.3 
 
 
253 aa  218  7.999999999999999e-56  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  49.61 
 
 
259 aa  212  4.9999999999999996e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  47.74 
 
 
282 aa  211  1e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  47.77 
 
 
263 aa  209  3e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  49.33 
 
 
249 aa  208  1e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  47.52 
 
 
250 aa  203  3e-51  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  45.98 
 
 
269 aa  202  6e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  48.73 
 
 
258 aa  201  9.999999999999999e-51  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  48 
 
 
254 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  49 
 
 
258 aa  196  3e-49  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  48.59 
 
 
258 aa  195  6e-49  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  48.59 
 
 
258 aa  195  6e-49  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  47.18 
 
 
276 aa  193  3e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  45.85 
 
 
269 aa  192  6e-48  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  44.44 
 
 
287 aa  192  7e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  47.01 
 
 
258 aa  190  2e-47  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  45.88 
 
 
259 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  47.66 
 
 
253 aa  188  9e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  43.64 
 
 
251 aa  187  3e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  42.46 
 
 
252 aa  184  2.0000000000000003e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  46.61 
 
 
258 aa  178  8e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  43.28 
 
 
265 aa  177  2e-43  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  45.53 
 
 
258 aa  173  2.9999999999999996e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  42.19 
 
 
258 aa  172  5e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  44.77 
 
 
250 aa  171  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  41.77 
 
 
265 aa  171  2e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  44.64 
 
 
264 aa  169  4e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  40 
 
 
270 aa  166  2.9999999999999998e-40  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  44.16 
 
 
262 aa  166  5e-40  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  43.75 
 
 
258 aa  166  5.9999999999999996e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  40.97 
 
 
257 aa  165  9e-40  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  42.19 
 
 
265 aa  165  1.0000000000000001e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  43.44 
 
 
255 aa  164  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  42.28 
 
 
277 aa  164  2.0000000000000002e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  40 
 
 
270 aa  163  4.0000000000000004e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  45.85 
 
 
259 aa  162  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  42.42 
 
 
264 aa  162  6e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  43.72 
 
 
264 aa  162  8.000000000000001e-39  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  41.56 
 
 
287 aa  161  1e-38  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  43.29 
 
 
264 aa  161  1e-38  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  42.86 
 
 
262 aa  160  3e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  41.84 
 
 
270 aa  159  4e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  42.86 
 
 
266 aa  159  7e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  40.34 
 
 
271 aa  158  1e-37  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  41.13 
 
 
262 aa  157  2e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  36.54 
 
 
266 aa  157  2e-37  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  38.37 
 
 
272 aa  156  5.0000000000000005e-37  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  40.43 
 
 
262 aa  156  5.0000000000000005e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  42.17 
 
 
269 aa  155  8e-37  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  41.15 
 
 
265 aa  154  2e-36  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  41.15 
 
 
264 aa  154  2e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  44.39 
 
 
262 aa  153  2.9999999999999998e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  34.55 
 
 
265 aa  153  2.9999999999999998e-36  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  43.39 
 
 
283 aa  153  4e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  38.14 
 
 
260 aa  153  4e-36  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  40.43 
 
 
262 aa  152  5e-36  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  41.59 
 
 
266 aa  152  5.9999999999999996e-36  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  34.15 
 
 
265 aa  152  5.9999999999999996e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  41.41 
 
 
271 aa  151  1e-35  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  41.31 
 
 
266 aa  151  1e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  39.83 
 
 
265 aa  150  3e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  40.27 
 
 
265 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  40.89 
 
 
263 aa  149  5e-35  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  40.27 
 
 
266 aa  149  6e-35  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  40.44 
 
 
262 aa  148  1.0000000000000001e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  38.61 
 
 
266 aa  148  1.0000000000000001e-34  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  38.06 
 
 
273 aa  147  2.0000000000000003e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  42.55 
 
 
271 aa  146  3e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  39.38 
 
 
266 aa  146  3e-34  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  37.83 
 
 
260 aa  147  3e-34  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  38.67 
 
 
261 aa  145  8.000000000000001e-34  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  42.69 
 
 
269 aa  145  1e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  41.13 
 
 
262 aa  144  2e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  38.94 
 
 
266 aa  144  2e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  37.12 
 
 
260 aa  144  2e-33  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  37.85 
 
 
263 aa  144  2e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  38.94 
 
 
281 aa  144  2e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  38.96 
 
 
267 aa  144  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  38.94 
 
 
281 aa  144  2e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  38.5 
 
 
266 aa  143  3e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  38.86 
 
 
264 aa  143  4e-33  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  38.5 
 
 
266 aa  142  5e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  37.8 
 
 
267 aa  142  9e-33  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  39.22 
 
 
267 aa  141  9.999999999999999e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  35.98 
 
 
261 aa  141  9.999999999999999e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.04 
 
 
266 aa  142  9.999999999999999e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  33.2 
 
 
260 aa  140  1.9999999999999998e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  36.11 
 
 
264 aa  140  1.9999999999999998e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  39.22 
 
 
270 aa  140  3e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  40.23 
 
 
259 aa  140  3e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.77 
 
 
263 aa  140  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.89 
 
 
261 aa  140  3.9999999999999997e-32  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  38.05 
 
 
266 aa  139  7e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  37.13 
 
 
269 aa  139  7.999999999999999e-32  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  38.1 
 
 
266 aa  138  8.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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