More than 300 homologs were found in PanDaTox collection
for query gene Bxe_A4474 on replicon NC_007951
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  535  1e-151  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  91.11 
 
 
270 aa  488  1e-137  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  66.16 
 
 
271 aa  348  6e-95  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  65.9 
 
 
266 aa  342  4e-93  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  64.89 
 
 
266 aa  341  8e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  65.52 
 
 
265 aa  338  5.9999999999999996e-92  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  64.12 
 
 
281 aa  338  5.9999999999999996e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  64.12 
 
 
281 aa  338  5.9999999999999996e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  63.6 
 
 
266 aa  334  7e-91  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  63.22 
 
 
266 aa  329  2e-89  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  62.84 
 
 
266 aa  328  6e-89  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  61.92 
 
 
285 aa  324  9e-88  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  61.6 
 
 
271 aa  322  5e-87  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  61.69 
 
 
266 aa  317  2e-85  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  58.2 
 
 
265 aa  309  2.9999999999999997e-83  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  64.64 
 
 
269 aa  309  4e-83  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  58.78 
 
 
265 aa  306  3e-82  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  61 
 
 
266 aa  305  5.0000000000000004e-82  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  60.84 
 
 
270 aa  305  6e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  57.09 
 
 
269 aa  304  1.0000000000000001e-81  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  58.17 
 
 
265 aa  300  1e-80  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  57.85 
 
 
265 aa  300  2e-80  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  57.36 
 
 
269 aa  298  5e-80  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  57.03 
 
 
265 aa  296  2e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  56.32 
 
 
269 aa  295  4e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  57.79 
 
 
264 aa  293  2e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  59.54 
 
 
266 aa  288  6e-77  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  57.41 
 
 
270 aa  285  4e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  57.79 
 
 
264 aa  285  5e-76  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  54.02 
 
 
264 aa  284  1.0000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  57.2 
 
 
263 aa  276  2e-73  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  54.65 
 
 
271 aa  275  7e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  57.2 
 
 
262 aa  274  1.0000000000000001e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  56.81 
 
 
262 aa  270  2e-71  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  52.27 
 
 
269 aa  258  1e-67  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  49.43 
 
 
267 aa  249  4e-65  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  50.19 
 
 
260 aa  248  5e-65  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  51.76 
 
 
262 aa  248  6e-65  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  52.16 
 
 
262 aa  248  8e-65  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  49.81 
 
 
260 aa  248  8e-65  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  50.19 
 
 
264 aa  246  3e-64  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  50.19 
 
 
264 aa  246  3e-64  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  47.45 
 
 
260 aa  244  9.999999999999999e-64  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  49.05 
 
 
266 aa  244  9.999999999999999e-64  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  48.24 
 
 
261 aa  243  1.9999999999999999e-63  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  49.81 
 
 
266 aa  243  3e-63  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  47.37 
 
 
266 aa  242  3.9999999999999997e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  49.41 
 
 
262 aa  239  2.9999999999999997e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  48.24 
 
 
262 aa  238  6.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  49.24 
 
 
266 aa  234  8e-61  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  49.81 
 
 
262 aa  232  4.0000000000000004e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  47.91 
 
 
264 aa  231  9e-60  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  49.03 
 
 
262 aa  223  4e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  57.51 
 
 
199 aa  219  3.9999999999999997e-56  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  44.75 
 
 
257 aa  214  9.999999999999999e-55  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  46.67 
 
 
267 aa  214  9.999999999999999e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  45.1 
 
 
287 aa  211  1e-53  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  45.45 
 
 
263 aa  206  4e-52  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  54.41 
 
 
264 aa  204  9e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  49.78 
 
 
269 aa  204  1e-51  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  45.35 
 
 
268 aa  196  4.0000000000000005e-49  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  43.86 
 
 
269 aa  174  9.999999999999999e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  41.73 
 
 
283 aa  174  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  42.67 
 
 
250 aa  171  2e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  40 
 
 
296 aa  166  2.9999999999999998e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  41.26 
 
 
269 aa  166  5e-40  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  42.22 
 
 
259 aa  164  1.0000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  48.63 
 
 
258 aa  162  5.0000000000000005e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  37.6 
 
 
271 aa  161  1e-38  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  39.53 
 
 
255 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  41.96 
 
 
253 aa  160  2e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.56 
 
 
252 aa  158  9e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  39.46 
 
 
269 aa  158  1e-37  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  41.56 
 
 
259 aa  157  2e-37  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  39.65 
 
 
269 aa  156  3e-37  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  42.98 
 
 
254 aa  154  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  39.11 
 
 
253 aa  153  2e-36  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  39.02 
 
 
276 aa  151  1e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  37.78 
 
 
266 aa  149  5e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  39.38 
 
 
250 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  40 
 
 
258 aa  147  3e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  38.57 
 
 
249 aa  146  3e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  38.84 
 
 
258 aa  145  7.0000000000000006e-34  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  38.39 
 
 
258 aa  144  2e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  38.39 
 
 
258 aa  144  2e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  39.21 
 
 
249 aa  144  2e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  38.77 
 
 
262 aa  143  2e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  40.37 
 
 
269 aa  144  2e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  47.45 
 
 
271 aa  142  5e-33  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  36.12 
 
 
272 aa  142  6e-33  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  39.15 
 
 
259 aa  141  9e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  39.56 
 
 
258 aa  141  9e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  36.36 
 
 
263 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  35.56 
 
 
266 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  35.56 
 
 
262 aa  140  3e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  37.61 
 
 
261 aa  139  7e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  40.44 
 
 
255 aa  138  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.17 
 
 
261 aa  138  1e-31  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  41.15 
 
 
287 aa  137  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  37.18 
 
 
263 aa  136  4e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
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