| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3938 |
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| Symbol | |
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| ID | 5110161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4324280 |
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| End bp | 4325068 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505201 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001189417 |
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| Protein GI | 146308952 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCT ATGCATTGAT CACCGGCGCC TCCAGCGGCC TCGGCCTGGC CATGGCCGAG
GCCCTGGCGC GTCGGGGGCG CAACCTGATA TTGGTGGCCA GACGGCGCGA CGCGCTGGAG
AGCATCGCCT GCGAGTTGGC GCAGCGCTTC GGCGTCGACG TGCTGTTTCG TCTGTGCGAC
CTCAGCGAGC CACTGCAGAT ATCCGGGCTG CTGCATGAGC TTGAGCAGGG GCAGTGGCGG
ATCGACCTGC TGGTGAACAA CGCCGGCCTC GGTTGCGCAG GCGCCTTTCT CGAACAGGAC
TGGGGCCGCG AGCAGGAGCA GCTGGAGGTC AACGTGCTGG CGCTGACGCG GCTATGTCAC
GCCCTCGGCC AGCATATGGC CGAACGTGGC GGTGGGCAGA TTCTCAACGT GGCGTCGGTC
GCAGCCTTTC AACCGGGCCC CTGGATGAGC AGCTACTACG CCAGCAAGGC CTATGTGCTG
CACTTTTCCG AGGGGCTGCG TGAGGAGCTG CGCCAGCGTG GTGTCCGCGT TTGCGTGCTC
TGCCCCGGTC CGACGCGCAG CGCCTTCTTC CGCGCCGCCG GGATGAACGT CAGCCGCCTC
GAGAGCAGCA AGCTGATGAT GAGCGCGGAA GAGGTGGCGT TGATCACCGT CCGCGCCCTG
GAAAAGAACC GCGCCATCAT CATCCCCGGC TGGCGCAACC GTCTGCTGGC GTTGAGTTCG
CGCCTGGCAC CACGCTGGCT GGTGCGCAAG CTCAGCGGCC GCCTGACACG CCCCTTCACC
CAAGGCTGA
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| Protein sequence | MPSYALITGA SSGLGLAMAE ALARRGRNLI LVARRRDALE SIACELAQRF GVDVLFRLCD
LSEPLQISGL LHELEQGQWR IDLLVNNAGL GCAGAFLEQD WGREQEQLEV NVLALTRLCH
ALGQHMAERG GGQILNVASV AAFQPGPWMS SYYASKAYVL HFSEGLREEL RQRGVRVCVL
CPGPTRSAFF RAAGMNVSRL ESSKLMMSAE EVALITVRAL EKNRAIIIPG WRNRLLALSS
RLAPRWLVRK LSGRLTRPFT QG
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