More than 300 homologs were found in PanDaTox collection
for query gene Rleg_0887 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  531  1e-150  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  67.05 
 
 
266 aa  365  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  65.4 
 
 
266 aa  362  4e-99  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  64.39 
 
 
266 aa  354  6.999999999999999e-97  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  53.54 
 
 
264 aa  283  3.0000000000000004e-75  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  50.78 
 
 
265 aa  258  6e-68  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  47.88 
 
 
264 aa  250  2e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  48.26 
 
 
266 aa  249  3e-65  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  48.11 
 
 
271 aa  248  7e-65  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  47.49 
 
 
266 aa  244  6.999999999999999e-64  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  48.03 
 
 
281 aa  244  8e-64  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  48.03 
 
 
281 aa  244  8e-64  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  47.24 
 
 
270 aa  243  1.9999999999999999e-63  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  47.37 
 
 
270 aa  242  3.9999999999999997e-63  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  47.1 
 
 
266 aa  241  1e-62  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  47.15 
 
 
270 aa  241  1e-62  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  47.29 
 
 
271 aa  239  2.9999999999999997e-62  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  45.95 
 
 
266 aa  239  2.9999999999999997e-62  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  45.74 
 
 
265 aa  238  6.999999999999999e-62  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  44.02 
 
 
265 aa  237  1e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  45.91 
 
 
266 aa  236  3e-61  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  46.85 
 
 
266 aa  236  3e-61  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  49.41 
 
 
262 aa  236  4e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  48.43 
 
 
263 aa  235  5.0000000000000005e-61  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  49.05 
 
 
270 aa  235  6e-61  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  49.02 
 
 
262 aa  232  4.0000000000000004e-60  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  46.67 
 
 
269 aa  231  9e-60  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  44.53 
 
 
285 aa  229  3e-59  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  46.24 
 
 
266 aa  228  6e-59  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  45.21 
 
 
266 aa  227  1e-58  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  47.73 
 
 
267 aa  228  1e-58  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  47.15 
 
 
265 aa  226  3e-58  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  47.06 
 
 
265 aa  226  3e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  48.46 
 
 
271 aa  225  6e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  46.74 
 
 
267 aa  223  3e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  45.53 
 
 
269 aa  221  9.999999999999999e-57  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  46.69 
 
 
265 aa  220  9.999999999999999e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  46.21 
 
 
264 aa  220  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  44.71 
 
 
269 aa  217  2e-55  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  44.06 
 
 
269 aa  213  2.9999999999999995e-54  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  42.25 
 
 
260 aa  207  2e-52  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  40.15 
 
 
260 aa  206  4e-52  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  43.19 
 
 
262 aa  203  2e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  42.13 
 
 
262 aa  203  2e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  43.58 
 
 
262 aa  203  3e-51  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  40.77 
 
 
260 aa  202  3e-51  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  42.8 
 
 
262 aa  202  5e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  41.92 
 
 
262 aa  202  5e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  40.55 
 
 
261 aa  199  3e-50  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  44.15 
 
 
269 aa  199  3e-50  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  46.21 
 
 
269 aa  197  2.0000000000000003e-49  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  43.18 
 
 
264 aa  194  9e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  43.89 
 
 
268 aa  194  1e-48  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  41.86 
 
 
264 aa  191  8e-48  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  41.47 
 
 
264 aa  190  2e-47  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  41.38 
 
 
263 aa  189  4e-47  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  41.89 
 
 
283 aa  186  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.73 
 
 
257 aa  183  2.0000000000000003e-45  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  44.62 
 
 
199 aa  182  6e-45  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  39.69 
 
 
287 aa  178  9e-44  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  40.93 
 
 
262 aa  178  9e-44  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  40.53 
 
 
259 aa  153  2.9999999999999998e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  46.46 
 
 
264 aa  151  1e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  38.18 
 
 
271 aa  145  6e-34  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  37.75 
 
 
259 aa  145  7.0000000000000006e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  43.3 
 
 
271 aa  144  2e-33  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  44.81 
 
 
258 aa  143  3e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  37.22 
 
 
269 aa  142  5e-33  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  37.72 
 
 
262 aa  141  9.999999999999999e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  36.77 
 
 
269 aa  141  9.999999999999999e-33  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  38.1 
 
 
296 aa  138  8.999999999999999e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  39.11 
 
 
253 aa  137  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  33.77 
 
 
291 aa  135  5e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.43 
 
 
267 aa  134  9.999999999999999e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  32.93 
 
 
255 aa  134  9.999999999999999e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  39.13 
 
 
263 aa  134  9.999999999999999e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  38.25 
 
 
269 aa  135  9.999999999999999e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  37.5 
 
 
259 aa  134  1.9999999999999998e-30  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  37.34 
 
 
269 aa  134  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  35.36 
 
 
259 aa  132  3.9999999999999996e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  31.54 
 
 
265 aa  132  5e-30  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  37.95 
 
 
272 aa  132  6e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  42.71 
 
 
267 aa  130  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  31.12 
 
 
265 aa  130  2.0000000000000002e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  35.43 
 
 
258 aa  129  4.0000000000000003e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  35.5 
 
 
263 aa  129  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  40.82 
 
 
259 aa  128  8.000000000000001e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  37.44 
 
 
360 aa  128  1.0000000000000001e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  38.74 
 
 
273 aa  128  1.0000000000000001e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  33.19 
 
 
252 aa  127  2.0000000000000002e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  38.84 
 
 
253 aa  127  2.0000000000000002e-28  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  37.89 
 
 
255 aa  126  3e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  34.25 
 
 
260 aa  127  3e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  34.7 
 
 
264 aa  126  3e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  33.92 
 
 
250 aa  125  5e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  35.4 
 
 
253 aa  125  6e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  32.6 
 
 
272 aa  125  6e-28  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  35.68 
 
 
250 aa  125  7e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  36 
 
 
258 aa  125  9e-28  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.7 
 
 
262 aa  124  1e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
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