More than 300 homologs were found in PanDaTox collection
for query gene Strop_0124 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  100 
 
 
269 aa  545  1e-154  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  85.87 
 
 
269 aa  473  1e-132  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  56.61 
 
 
250 aa  247  2e-64  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  55.23 
 
 
259 aa  234  1.0000000000000001e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  55.37 
 
 
253 aa  228  1e-58  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  50.81 
 
 
252 aa  227  2e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  50.61 
 
 
258 aa  227  2e-58  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  55.46 
 
 
259 aa  226  4e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  48.4 
 
 
263 aa  221  8e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  52.8 
 
 
254 aa  218  7.999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  51.37 
 
 
250 aa  213  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  48.63 
 
 
269 aa  209  3e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  48.15 
 
 
258 aa  209  3e-53  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  47.92 
 
 
249 aa  207  2e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  46.22 
 
 
251 aa  203  2e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  46.77 
 
 
296 aa  200  1.9999999999999998e-50  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  47.18 
 
 
253 aa  200  1.9999999999999998e-50  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  46.53 
 
 
249 aa  190  2e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  46.15 
 
 
258 aa  185  6e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  46.75 
 
 
258 aa  184  1.0000000000000001e-45  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  46.72 
 
 
255 aa  183  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  43.43 
 
 
269 aa  182  5.0000000000000004e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  46.75 
 
 
258 aa  182  5.0000000000000004e-45  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  46.75 
 
 
258 aa  182  5.0000000000000004e-45  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  43.2 
 
 
282 aa  181  1e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  48.39 
 
 
258 aa  180  2.9999999999999997e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  45.75 
 
 
258 aa  176  2e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  43.41 
 
 
259 aa  176  3e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  39.69 
 
 
271 aa  168  1e-40  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  40.81 
 
 
265 aa  167  2e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  41.26 
 
 
270 aa  166  4e-40  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  41.26 
 
 
270 aa  166  5e-40  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  42.15 
 
 
265 aa  165  9e-40  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  41.7 
 
 
266 aa  164  1.0000000000000001e-39  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  41.27 
 
 
267 aa  164  1.0000000000000001e-39  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  38.62 
 
 
272 aa  164  1.0000000000000001e-39  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  42.15 
 
 
281 aa  164  2.0000000000000002e-39  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  42.15 
 
 
281 aa  164  2.0000000000000002e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  43.3 
 
 
287 aa  163  3e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  42.15 
 
 
266 aa  163  3e-39  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  43.04 
 
 
258 aa  162  5.0000000000000005e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  41.7 
 
 
266 aa  162  5.0000000000000005e-39  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  42.6 
 
 
271 aa  162  6e-39  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  40.69 
 
 
264 aa  161  8.000000000000001e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  42.15 
 
 
266 aa  161  8.000000000000001e-39  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  42.28 
 
 
276 aa  161  9e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  43.05 
 
 
270 aa  160  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  36.43 
 
 
265 aa  160  1e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  39.64 
 
 
264 aa  159  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  41.26 
 
 
266 aa  159  6e-38  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  39.53 
 
 
265 aa  158  9e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  40.99 
 
 
262 aa  156  3e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  41.89 
 
 
263 aa  156  3e-37  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  41.44 
 
 
262 aa  156  4e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  39.68 
 
 
269 aa  154  1e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  40.81 
 
 
257 aa  154  1e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  44.89 
 
 
255 aa  153  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  39.1 
 
 
277 aa  154  2e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  39.91 
 
 
266 aa  154  2e-36  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  39.46 
 
 
265 aa  154  2e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  38.31 
 
 
273 aa  154  2e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  31.05 
 
 
265 aa  153  2.9999999999999998e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  36.29 
 
 
271 aa  152  5e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  39.73 
 
 
271 aa  151  1e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  39.91 
 
 
267 aa  151  1e-35  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  40.69 
 
 
266 aa  150  2e-35  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  30.65 
 
 
265 aa  150  2e-35  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  38 
 
 
263 aa  150  2e-35  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  39.01 
 
 
265 aa  149  4e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  40.08 
 
 
259 aa  149  5e-35  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  40 
 
 
259 aa  148  8e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  34.14 
 
 
285 aa  145  6e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  38.29 
 
 
262 aa  145  6e-34  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  35.43 
 
 
267 aa  145  9e-34  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  37.67 
 
 
264 aa  144  1e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.58 
 
 
264 aa  144  1e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  37.05 
 
 
269 aa  144  1e-33  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  38.07 
 
 
258 aa  143  3e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  38.04 
 
 
269 aa  142  5e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  40.87 
 
 
270 aa  142  6e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  36.32 
 
 
269 aa  142  7e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  38.74 
 
 
261 aa  142  8e-33  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  37.39 
 
 
260 aa  141  9.999999999999999e-33  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  33.08 
 
 
267 aa  141  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  36.77 
 
 
266 aa  141  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  40.09 
 
 
262 aa  140  1.9999999999999998e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  36.56 
 
 
260 aa  140  1.9999999999999998e-32  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  40.81 
 
 
269 aa  140  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  36.61 
 
 
269 aa  140  3e-32  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  38.31 
 
 
262 aa  139  4.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.2 
 
 
266 aa  139  4.999999999999999e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  34.32 
 
 
255 aa  139  6e-32  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  35.14 
 
 
264 aa  139  6e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  35.65 
 
 
266 aa  139  7e-32  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  36.94 
 
 
262 aa  138  7.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  38.76 
 
 
283 aa  138  7.999999999999999e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  37.28 
 
 
262 aa  138  8.999999999999999e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.36 
 
 
262 aa  138  8.999999999999999e-32  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  36.36 
 
 
262 aa  138  8.999999999999999e-32  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  35.43 
 
 
269 aa  137  2e-31  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
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