Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1178 |
Symbol | |
ID | 8410698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1118974 |
End bp | 1119753 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645019514 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003177011 |
Protein GI | 257387238 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.82399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA GCGAGGCAGC GGGGACGGCC CTGATCACGG GTGCCAGCGC CGGGATCGGT GCGGCACTGG CCCGGGAGTT CGCTCGCCAC GGACACGACC TCGTCCTCGT GGCCCGCCGA GAGGACCGTC TCGAATCACT CGCGGCCGAC CTCGAACGCC ACGGCGTCAC GGCTCACGTC GTCGCGATGG ATCTGGCGGC GGACGACGCG CCCGATCAGC TGTGGGCGAC GCTAGAGGAC CGTGGCATCT CCGTCCAGAC GCTCGTCAAC AACGTCGGCG TCGGCACGCA CGGCCCCTTC GCGGAGAGCG ATCCCGACGC GGAGCGGAGA CAGCTCCAGC TCAACGTCTC GGTGCTCGTC GAACTGACCC GCCGGTTTCT CGACGATCGG GACGCCGGGC AGGTCCTCAA CGTCGGTTCG GTCGCGGGCT TCGTCCCCGG CGCGTACATG GCGGGCTACT ACGCCAGCAA GGCCTACGTC AACAGCTTTT CCCAGGCGCT GGCGGCCGAG CACCGGGACA GCGCCCTCGA CGTGACGGTG CTGTGTCCCG GCCCGACCGA GACGGAGTTC CAGGAGCGGG CGGGGATGGG CGACTCGGCG GTCGGTCGCA CGCTCTGCTA CACGCCCGAA CGGGTGGCGC GGGCGGGATA CCGGGGGCTC CAGCGCGGCG ACCCCGTCGT CGTGCCGGGG CTGGCGATGA CCGTCCTCGT GGGTCTGCTC TCGTTCGTCC CGCGCCCACT CCAGCGGTGG GGAAGCCGGC TCGTCAACGG GAATCGCTGA
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Protein sequence | MSDSEAAGTA LITGASAGIG AALAREFARH GHDLVLVARR EDRLESLAAD LERHGVTAHV VAMDLAADDA PDQLWATLED RGISVQTLVN NVGVGTHGPF AESDPDAERR QLQLNVSVLV ELTRRFLDDR DAGQVLNVGS VAGFVPGAYM AGYYASKAYV NSFSQALAAE HRDSALDVTV LCPGPTETEF QERAGMGDSA VGRTLCYTPE RVARAGYRGL QRGDPVVVPG LAMTVLVGLL SFVPRPLQRW GSRLVNGNR
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