More than 300 homologs were found in PanDaTox collection
for query gene Caul_0512 on replicon NC_010338
Organism: Caulobacter sp. K31



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  100 
 
 
269 aa  543  1e-153  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  46.44 
 
 
266 aa  224  9e-58  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  46.07 
 
 
266 aa  221  9e-57  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  43.45 
 
 
266 aa  217  2e-55  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  44.71 
 
 
266 aa  217  2e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  45.25 
 
 
270 aa  215  5e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  44.75 
 
 
264 aa  213  1.9999999999999998e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  45.28 
 
 
264 aa  214  1.9999999999999998e-54  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  44.19 
 
 
265 aa  209  6e-53  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  44.96 
 
 
266 aa  207  1e-52  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  45.38 
 
 
263 aa  206  3e-52  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  43.77 
 
 
266 aa  206  4e-52  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  43.36 
 
 
265 aa  206  4e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  46.51 
 
 
262 aa  205  6e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  46.51 
 
 
262 aa  205  7e-52  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  45.12 
 
 
266 aa  204  1e-51  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  49.78 
 
 
270 aa  204  1e-51  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  43.4 
 
 
281 aa  204  1e-51  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  43.4 
 
 
281 aa  204  1e-51  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  44.92 
 
 
270 aa  203  2e-51  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  44.53 
 
 
266 aa  203  2e-51  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  47.6 
 
 
266 aa  202  3e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  42.64 
 
 
266 aa  201  7e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  44.19 
 
 
265 aa  200  1.9999999999999998e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  45.95 
 
 
266 aa  200  1.9999999999999998e-50  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  42.64 
 
 
266 aa  200  3e-50  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  42.64 
 
 
269 aa  198  7e-50  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  43.46 
 
 
271 aa  197  1.0000000000000001e-49  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  42.32 
 
 
271 aa  197  2.0000000000000003e-49  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  43.18 
 
 
271 aa  195  7e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  47.19 
 
 
265 aa  192  5e-48  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  40.94 
 
 
260 aa  191  9e-48  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  42.41 
 
 
269 aa  191  1e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  43.14 
 
 
264 aa  191  2e-47  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  40.08 
 
 
261 aa  189  4e-47  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  43.14 
 
 
267 aa  188  7e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  44.98 
 
 
265 aa  188  8e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  46.29 
 
 
265 aa  187  1e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  42.86 
 
 
269 aa  184  1.0000000000000001e-45  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  41.34 
 
 
262 aa  183  3e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  45.59 
 
 
269 aa  182  4.0000000000000006e-45  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  47.41 
 
 
264 aa  182  5.0000000000000004e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  40.55 
 
 
260 aa  177  1e-43  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  39.53 
 
 
269 aa  177  1e-43  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  38.91 
 
 
285 aa  176  3e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  45.78 
 
 
262 aa  176  3e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  45.65 
 
 
262 aa  176  3e-43  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  44.44 
 
 
264 aa  176  4e-43  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  44 
 
 
264 aa  175  8e-43  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  40.16 
 
 
260 aa  174  9.999999999999999e-43  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  39.76 
 
 
262 aa  174  9.999999999999999e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  40.82 
 
 
267 aa  171  7.999999999999999e-42  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  42.97 
 
 
270 aa  171  1e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  39.76 
 
 
262 aa  169  4e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  42.52 
 
 
262 aa  165  5.9999999999999996e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  39.69 
 
 
287 aa  165  6.9999999999999995e-40  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  38.19 
 
 
257 aa  163  3e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  40.46 
 
 
263 aa  162  6e-39  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  35.97 
 
 
283 aa  157  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  40.08 
 
 
268 aa  153  4e-36  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  39.82 
 
 
253 aa  142  5e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  37.5 
 
 
262 aa  141  9.999999999999999e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  35.68 
 
 
259 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  37.95 
 
 
259 aa  139  3.9999999999999997e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  37.29 
 
 
267 aa  139  4.999999999999999e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  37.13 
 
 
296 aa  139  7e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  35.43 
 
 
269 aa  137  2e-31  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  35.34 
 
 
266 aa  136  3.0000000000000003e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  35.59 
 
 
260 aa  135  8e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  43.23 
 
 
258 aa  135  9.999999999999999e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  37.55 
 
 
266 aa  134  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  39.68 
 
 
260 aa  133  3e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  35.27 
 
 
252 aa  133  3e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  40.66 
 
 
264 aa  133  3.9999999999999996e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  35.84 
 
 
250 aa  132  5e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  40.21 
 
 
264 aa  132  6.999999999999999e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  39.46 
 
 
199 aa  132  6.999999999999999e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  31.78 
 
 
261 aa  132  7.999999999999999e-30  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  34.05 
 
 
266 aa  132  9e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.78 
 
 
264 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  41.15 
 
 
263 aa  129  5.0000000000000004e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  31.4 
 
 
261 aa  129  5.0000000000000004e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
265 aa  127  2.0000000000000002e-28  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  33.33 
 
 
265 aa  127  2.0000000000000002e-28  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  33.18 
 
 
269 aa  126  3e-28  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  34 
 
 
258 aa  126  3e-28  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  36.69 
 
 
259 aa  125  6e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  34.98 
 
 
271 aa  125  7e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  32.62 
 
 
255 aa  125  8.000000000000001e-28  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  40.32 
 
 
268 aa  124  2e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  31.9 
 
 
262 aa  123  3e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  37 
 
 
255 aa  122  6e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.35 
 
 
263 aa  122  7e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  44.96 
 
 
264 aa  122  7e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  33.91 
 
 
267 aa  122  8e-27  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  41.88 
 
 
271 aa  122  9e-27  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  35.02 
 
 
263 aa  121  9.999999999999999e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  34.54 
 
 
262 aa  121  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  34.54 
 
 
262 aa  121  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  34.94 
 
 
262 aa  121  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>