More than 300 homologs were found in PanDaTox collection
for query gene Bpro_2349 on replicon NC_007948
Organism: Polaromonas sp. JS666



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  535  1e-151  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  89.43 
 
 
266 aa  480  1e-135  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  87.17 
 
 
266 aa  481  1e-135  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  65.4 
 
 
266 aa  362  4e-99  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  54.33 
 
 
264 aa  277  2e-73  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  51.32 
 
 
271 aa  254  1.0000000000000001e-66  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  49.05 
 
 
264 aa  251  1e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  50.97 
 
 
266 aa  250  1e-65  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  50.58 
 
 
265 aa  250  2e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  50.58 
 
 
281 aa  250  2e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  50.58 
 
 
281 aa  250  2e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  49.06 
 
 
270 aa  249  5e-65  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  48.52 
 
 
271 aa  246  3e-64  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  50.19 
 
 
266 aa  245  6e-64  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  49.05 
 
 
270 aa  244  9.999999999999999e-64  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  47.88 
 
 
266 aa  243  3e-63  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  50 
 
 
267 aa  240  2e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  47.49 
 
 
266 aa  240  2e-62  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  51.16 
 
 
262 aa  237  1e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  47.29 
 
 
285 aa  237  1e-61  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  48.43 
 
 
266 aa  235  4e-61  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  48.25 
 
 
266 aa  235  7e-61  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  46.77 
 
 
270 aa  234  1.0000000000000001e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  51.16 
 
 
262 aa  234  1.0000000000000001e-60  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  49.25 
 
 
270 aa  230  2e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  50 
 
 
263 aa  230  2e-59  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  47.88 
 
 
266 aa  229  3e-59  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  45.63 
 
 
269 aa  228  9e-59  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  48.85 
 
 
266 aa  226  3e-58  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  45.95 
 
 
269 aa  226  4e-58  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  44.4 
 
 
265 aa  224  8e-58  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  46.39 
 
 
265 aa  223  4e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  46.07 
 
 
269 aa  221  8e-57  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  47.49 
 
 
269 aa  220  1.9999999999999999e-56  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  47.88 
 
 
267 aa  218  7e-56  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  46.01 
 
 
265 aa  218  8.999999999999998e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  46.74 
 
 
265 aa  217  1e-55  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  41.47 
 
 
265 aa  218  1e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  42.52 
 
 
260 aa  212  5.999999999999999e-54  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  43.98 
 
 
260 aa  212  5.999999999999999e-54  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  42.91 
 
 
261 aa  207  1e-52  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  44.87 
 
 
262 aa  206  3e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  46.77 
 
 
264 aa  206  3e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  48.66 
 
 
269 aa  206  3e-52  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  45.95 
 
 
271 aa  206  3e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  44.83 
 
 
268 aa  204  1e-51  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  44.74 
 
 
269 aa  203  2e-51  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  44.7 
 
 
264 aa  203  2e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  45.28 
 
 
262 aa  202  6e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  41.76 
 
 
260 aa  200  1.9999999999999998e-50  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  44.23 
 
 
262 aa  199  3.9999999999999996e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  43.68 
 
 
262 aa  199  3.9999999999999996e-50  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  43.92 
 
 
262 aa  199  6e-50  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  42.31 
 
 
264 aa  191  9e-48  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  42.31 
 
 
264 aa  191  1e-47  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  40.77 
 
 
263 aa  189  2.9999999999999997e-47  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  43.61 
 
 
283 aa  182  4.0000000000000006e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  41.51 
 
 
287 aa  181  9.000000000000001e-45  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  42.86 
 
 
262 aa  181  1e-44  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  45.36 
 
 
199 aa  180  2e-44  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  40.78 
 
 
257 aa  173  1.9999999999999998e-42  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  44.53 
 
 
264 aa  148  8e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  38.12 
 
 
271 aa  145  5e-34  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  38.31 
 
 
259 aa  144  1e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  37.12 
 
 
259 aa  143  4e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  36.36 
 
 
259 aa  141  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  43.78 
 
 
258 aa  139  3.9999999999999997e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  38.67 
 
 
253 aa  139  6e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  35.65 
 
 
269 aa  139  6e-32  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  39.82 
 
 
269 aa  137  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  33.91 
 
 
269 aa  134  1.9999999999999998e-30  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  34.63 
 
 
291 aa  134  1.9999999999999998e-30  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  37.95 
 
 
264 aa  134  1.9999999999999998e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  39.49 
 
 
263 aa  133  3e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  36.4 
 
 
277 aa  132  5e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  34.47 
 
 
262 aa  132  6.999999999999999e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  40.61 
 
 
267 aa  131  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  38.33 
 
 
262 aa  131  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  38.33 
 
 
262 aa  131  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  34.51 
 
 
250 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  38.33 
 
 
262 aa  130  2.0000000000000002e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  41.12 
 
 
267 aa  130  3e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  41.12 
 
 
267 aa  130  3e-29  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  33.47 
 
 
263 aa  129  4.0000000000000003e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  34.89 
 
 
263 aa  129  4.0000000000000003e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  39 
 
 
273 aa  129  6e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  38.5 
 
 
257 aa  128  1.0000000000000001e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  35.98 
 
 
257 aa  127  1.0000000000000001e-28  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  34.51 
 
 
261 aa  127  2.0000000000000002e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  33.09 
 
 
267 aa  127  2.0000000000000002e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  29.54 
 
 
265 aa  127  2.0000000000000002e-28  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  36.8 
 
 
296 aa  127  2.0000000000000002e-28  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  29.11 
 
 
265 aa  126  4.0000000000000003e-28  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  35.37 
 
 
269 aa  125  5e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  32.63 
 
 
255 aa  125  6e-28  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  39.11 
 
 
267 aa  125  6e-28  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  36.44 
 
 
264 aa  125  7e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  36.82 
 
 
260 aa  124  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.4 
 
 
266 aa  124  1e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  34.51 
 
 
261 aa  125  1e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
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