More than 300 homologs were found in PanDaTox collection
for query gene Plim_1352 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  100 
 
 
271 aa  556  1e-157  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  44.79 
 
 
264 aa  219  5e-56  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  45 
 
 
261 aa  209  3e-53  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  44.62 
 
 
261 aa  207  2e-52  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  41.95 
 
 
269 aa  201  9.999999999999999e-51  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  43.45 
 
 
275 aa  198  6e-50  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  42.75 
 
 
264 aa  198  7e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  43.02 
 
 
291 aa  196  4.0000000000000005e-49  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  41.44 
 
 
264 aa  195  6e-49  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  45.74 
 
 
260 aa  195  7e-49  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  44.79 
 
 
271 aa  193  2e-48  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  40.15 
 
 
260 aa  193  2e-48  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  44.27 
 
 
275 aa  192  4e-48  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  44.19 
 
 
259 aa  191  9e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  44.15 
 
 
263 aa  189  4e-47  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  43.75 
 
 
258 aa  187  1e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  44.88 
 
 
262 aa  187  2e-46  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  44.88 
 
 
262 aa  187  2e-46  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  40.4 
 
 
257 aa  186  3e-46  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  39.68 
 
 
273 aa  186  3e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  44.44 
 
 
262 aa  184  1.0000000000000001e-45  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  42.68 
 
 
266 aa  182  7e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hit