More than 300 homologs were found in PanDaTox collection
for query gene Bphy_4200 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  100 
 
 
271 aa  539  9.999999999999999e-153  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  69.06 
 
 
266 aa  364  1e-100  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  69.06 
 
 
281 aa  364  1e-100  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  69.06 
 
 
281 aa  364  1e-100  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  69.47 
 
 
265 aa  363  2e-99  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  68.68 
 
 
266 aa  362  3e-99  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  68.44 
 
 
266 aa  358  6e-98  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  68.32 
 
 
271 aa  357  1.9999999999999998e-97  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  67.92 
 
 
266 aa  356  1.9999999999999998e-97  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  68.06 
 
 
266 aa  355  5.999999999999999e-97  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  69.26 
 
 
266 aa  352  5e-96  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  66.16 
 
 
270 aa  348  6e-95  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  66.02 
 
 
270 aa  348  6e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  61.89 
 
 
285 aa  338  5e-92  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  65.02 
 
 
266 aa  326  2.0000000000000001e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  68.34 
 
 
269 aa  324  1e-87  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  62.45 
 
 
270 aa  320  1.9999999999999998e-86  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  62.16 
 
 
269 aa  313  1.9999999999999998e-84  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  57.92 
 
 
265 aa  309  2.9999999999999997e-83  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  59.69 
 
 
269 aa  308  6.999999999999999e-83  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  59.23 
 
 
269 aa  307  1.0000000000000001e-82  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  58.46 
 
 
265 aa  306  2.0000000000000002e-82  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  59.33 
 
 
265 aa  303  2.0000000000000002e-81  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  58.96 
 
 
265 aa  301  8.000000000000001e-81  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  60.54 
 
 
266 aa  299  3e-80  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  57.52 
 
 
270 aa  295  6e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  57.14 
 
 
264 aa  291  9e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  56.6 
 
 
265 aa  290  2e-77  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  58.78 
 
 
262 aa  284  1.0000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  58.4 
 
 
263 aa  282  3.0000000000000004e-75  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  59.77 
 
 
271 aa  282  5.000000000000001e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  58.4 
 
 
262 aa  279  4e-74  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  56.13 
 
 
264 aa  279  4e-74  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  54.23 
 
 
269 aa  267  1e-70  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  53.53 
 
 
264 aa  267  2e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  49.26 
 
 
266 aa  247  1e-64  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  48.52 
 
 
266 aa  246  3e-64  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  49.03 
 
 
267 aa  244  8e-64  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  49.62 
 
 
266 aa  242  5e-63  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  49.61 
 
 
262 aa  242  5e-63  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  49.22 
 
 
262 aa  241  7.999999999999999e-63  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  48.64 
 
 
262 aa  240  1e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  48.46 
 
 
264 aa  240  2e-62  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  47.29 
 
 
266 aa  239  2.9999999999999997e-62  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  48.46 
 
 
264 aa  239  2.9999999999999997e-62  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  47.49 
 
 
261 aa  239  2.9999999999999997e-62  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  46.09 
 
 
262 aa  236  3e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  45.17 
 
 
260 aa  235  7e-61  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  46.54 
 
 
260 aa  234  2.0000000000000002e-60  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  46.33 
 
 
264 aa  232  6e-60  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  45 
 
 
260 aa  229  3e-59  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  60.31 
 
 
199 aa  229  5e-59  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  46.36 
 
 
262 aa  228  7e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  50.39 
 
 
267 aa  228  7e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  44.96 
 
 
287 aa  223  2e-57  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  44.75 
 
 
257 aa  219  5e-56  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  47.27 
 
 
262 aa  213  1.9999999999999998e-54  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  52.69 
 
 
264 aa  207  1e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  45.21 
 
 
263 aa  200  3e-50  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  46.36 
 
 
268 aa  197  2.0000000000000003e-49  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  42.32 
 
 
269 aa  197  2.0000000000000003e-49  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  42.53 
 
 
283 aa  174  9.999999999999999e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  47.83 
 
 
258 aa  158  1e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  40.34 
 
 
296 aa  158  1e-37  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  38.22 
 
 
266 aa  155  5.0000000000000005e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.22 
 
 
266 aa  155  6e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  39.57 
 
 
271 aa  154  2e-36  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  37.78 
 
 
262 aa  153  2.9999999999999998e-36  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  36.29 
 
 
269 aa  152  5e-36  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  39.75 
 
 
262 aa  149  5e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  37.72 
 
 
255 aa  146  3e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  46.08 
 
 
271 aa  145  5e-34  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  36.89 
 
 
269 aa  145  8.000000000000001e-34  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  38.94 
 
 
261 aa  145  9e-34  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  38.33 
 
 
252 aa  144  2e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  38.26 
 
 
263 aa  143  3e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  37.45 
 
 
257 aa  142  4e-33  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  38.2 
 
 
249 aa  142  4e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  38.5 
 
 
261 aa  142  5e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  36.44 
 
 
262 aa  142  6e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  38.34 
 
 
259 aa  142  7e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  43.75 
 
 
264 aa  142  8e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  40.41 
 
 
260 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  37.83 
 
 
259 aa  140  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  38.79 
 
 
259 aa  140  1.9999999999999998e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  38.22 
 
 
253 aa  140  3e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  41.15 
 
 
253 aa  140  3e-32  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.43 
 
 
267 aa  139  7e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  42.78 
 
 
266 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  39.3 
 
 
255 aa  138  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  36.24 
 
 
258 aa  137  2e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  41.03 
 
 
258 aa  136  3.0000000000000003e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  35.81 
 
 
258 aa  137  3.0000000000000003e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  41.36 
 
 
263 aa  136  4e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  36.56 
 
 
258 aa  136  4e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  40.41 
 
 
267 aa  135  6.0000000000000005e-31  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  32.9 
 
 
265 aa  135  7.000000000000001e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  38.95 
 
 
258 aa  135  8e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  34.58 
 
 
265 aa  134  9.999999999999999e-31  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  39.38 
 
 
264 aa  134  1.9999999999999998e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
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