| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4199 |
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| Symbol | |
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| ID | 6180569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1252538 |
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| End bp | 1253338 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683968 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810879 |
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| Protein GI | 172063228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.308915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0922746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG CACATCGCGG TACCGCCGTC ATTACCGGCG CATCGTCGGG CATTGGCGCA
ATCTACGCCG ACCGGCTCGC GGGCCGCGGC TACGACCTGA TCCTGGTTGC GCGCAACCGC
GACCGGCTGA CCGCCCTCGC CGAGCGCATC ACGAACGACA CGCAGCGCAG CGTGGAAATC
GTCGGCGCGG ACCTCAACGA CCGCGCCGCG CTCGCCACAG TCGAGGCGAA GCTGAAGCAG
GACGCGAGCA TCACGCTGCT CGTGAACAAC GCGGGCGTCG GCACGCACGC GCCGCTGCTC
GACAGCGACG TCGACGCGAT GACGCGGCTG ATCGACCTGA ACGTGACCGC GCTCACCCGC
CTGACCTATG CGGCCGTGCC CGGCTTCGTC GCACGCGGCC GCGGCGCCGT GATCAACATT
TCGTCGATCG TCGCGCTGTC GCCGGAAACG CTCAATGGTG TCTATGGGGG CAGCAAGGCG
TTCGTGCTCG CGTTCAGCCA GTCGCTGCAT CACGAACTCG CGGACCACGG CGTGCAGGTG
CAGGCCGTGC TGCCCGGCGC GACGGCCACC GACTTCTGGC AGACCGGCGG CCTGCCGCTC
GAACACCTGC CGAAGGAGAT CGTGATGTCG GCGTCCGACC TCGTCGACGC GGCGCTGGTC
GGCTTCGAGC GCGGCGAACT CGTGACGATT CCGTCGTTGC ATGCGGCTGA CGAATGGGAA
GCGTACGAGG CTGCGCGCCG CACGATGGCG CCGCATCTGT CGACGGATTC GCCGGCGCCG
CGCTATGCGG CTGCGCGCTA G
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| Protein sequence | MTEAHRGTAV ITGASSGIGA IYADRLAGRG YDLILVARNR DRLTALAERI TNDTQRSVEI
VGADLNDRAA LATVEAKLKQ DASITLLVNN AGVGTHAPLL DSDVDAMTRL IDLNVTALTR
LTYAAVPGFV ARGRGAVINI SSIVALSPET LNGVYGGSKA FVLAFSQSLH HELADHGVQV
QAVLPGATAT DFWQTGGLPL EHLPKEIVMS ASDLVDAALV GFERGELVTI PSLHAADEWE
AYEAARRTMA PHLSTDSPAP RYAAAR
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