Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0153 |
Symbol | |
ID | 7117636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 150302 |
End bp | 151090 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643522961 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002419028 |
Protein GI | 218528212 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.418257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.135019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAGG GAACCGTGCT GATCACCGGC GCCTCCTCCG GCATCGGCGC CGTCTACGCC GACCGCTTCG CCGGGCGCGG CCACGACCTC ATCCTCGTCG CCCGCAACAA GGCGCGGCTC GACGCCGTCG CCGAGGATCT CACCCGCCGC CACGGCGTGT CGGTTCGGAC CGTCGAGGCC GATCTGACGG ACCGGGCGGA GCTCGCCGCG GTCGAGGCGA TCCTGAAGGA CGAGGCGGAC ATCACGCATC TCGTCAACAA TGCCGGCTTT GGCTCCGCCG CGCCGCTCGC CTCGGCCTCG GTCGATGAGA TGGAGCGGAT GATCGCCATC AACGTCACCG CGCCGATGCG CCTGACCTAC GCGGCGGTGC CGGCTTTCAC GAGCCGCGGA CAGGGCACGA TCATCAACAT CGCCTCGATC GTCGCCATCG GCCCGGAGGT CCTGAACGGC GTCTATGGCG GCTCGAAGTC GTTCGTCCTC AGCTTCAGCC ACGCCCTGCG CAAGGAGCTC GCGGGCACCG GGGTCGCGGT GCAGGTGGTG CTGCCCGGCG CGACCGGAAC CGAGTTCTGG GACGTCGCCG GCCTGCCCGC GAGCAACCTG CCGAAGGAGT GGGTGATGTC GGCCGAAGAT CTGGTCGATG CGGCCCTGGC CGGCCTCGAC CGGGGCGAGC TCGCAACCAT CCCGTCGCTT CAGGACGCGG CCGAATGGGA CGCCTGGGAG GCCGCACGCG CGACCATGCT GCCGCATCTG TCGAGCGCCG TCCCGGCCGC ACGCTACCGC GCAGCTTGA
|
Protein sequence | MSQGTVLITG ASSGIGAVYA DRFAGRGHDL ILVARNKARL DAVAEDLTRR HGVSVRTVEA DLTDRAELAA VEAILKDEAD ITHLVNNAGF GSAAPLASAS VDEMERMIAI NVTAPMRLTY AAVPAFTSRG QGTIINIASI VAIGPEVLNG VYGGSKSFVL SFSHALRKEL AGTGVAVQVV LPGATGTEFW DVAGLPASNL PKEWVMSAED LVDAALAGLD RGELATIPSL QDAAEWDAWE AARATMLPHL SSAVPAARYR AA
|
| |