Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4523 |
Symbol | |
ID | 4041382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1128168 |
End bp | 1128968 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979945 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_586657 |
Protein GI | 94313448 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.642907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0040913 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGCAAA CTCATCTCGG CACGGCCCTG GTTACCGGCG CATCCTCGGG CATCGGCGCC ATCTACGCAG ACCGTCTGGC ACGCCGCGGC TATGACCTGA TCCTCGTCGC CCGCAATCGC GACAAGCTCG ACACCCTGGC CCGGCGCATC ACTGACGATA CGCAGCGCGT GGTCGAAGTC TTCCCGGCTG ATCTCAACGA CCGCCAATCG CTCGCACGGG TGGAGGAAAA GCTGCGGCAG GACGCCAGCA TCACGCTGCT GGTCAACAAC GCAGGCGTCG GCACGCACAC GCCACTGCTC GACAGCGATG TCGATGCCAT GAACCGGATG ATCGACCTCA ACGTCACCGC GCTGACGCGC CTGACCTATG CCGCCGTGCC GGGATTCGTC GCGCGCGGCC GTGGCGCGAT CATCAATATT TCGTCGATCG TCGGCATCGC GCCCGAAATC CTGAACGGGG TGTACGGCGG CAGCAAGGCG TTCGTGCTGG CATTCAGCCA GTCGCTGCAT CACGAACTCG CGGCCAAGGG GCTGCGCGTG CAGGCGGTAC TGCCGGGGGC GACCGCCACG GACTTCTGGG AAACCGGTGG CCTGCCGATC GAACATCTCG ACAAGGCGAT CGTCATGCCG GCTGAAGCGA TGGTCGATGC GGCGCTGGTA GGCTTCGATC GTGGCGAGCT GGTGACGATT CCACCGCTGC ACGCGATCGA GCAATGGAAT GCGTATGAAG GCGCGCGCCA GGCGATGGCG GGCCTGCTAT CGACCAACAC TCCCGCGCCC CGGTACGCGA CGGGACGCTG A
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Protein sequence | MTQTHLGTAL VTGASSGIGA IYADRLARRG YDLILVARNR DKLDTLARRI TDDTQRVVEV FPADLNDRQS LARVEEKLRQ DASITLLVNN AGVGTHTPLL DSDVDAMNRM IDLNVTALTR LTYAAVPGFV ARGRGAIINI SSIVGIAPEI LNGVYGGSKA FVLAFSQSLH HELAAKGLRV QAVLPGATAT DFWETGGLPI EHLDKAIVMP AEAMVDAALV GFDRGELVTI PPLHAIEQWN AYEGARQAMA GLLSTNTPAP RYATGR
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