Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_63890 |
Symbol | |
ID | 4383301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5693711 |
End bp | 5694508 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639327760 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_793298 |
Protein GI | 116052980 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAC AGATTGGCAA TGGCGTCGCC CTGATCACCG GCGCCTCTTC CGGAATCGGC GCGACCTACG CCGAGCACTT GGCCCGCCGT GGCCACGACC TGTTGCTGGT GGCGCGCGAC CGGCAACGCC TGGAAGCCCT GGCGGATCGA CTTCGCCAAG CCCACGGGGT CAGGGTGGAG ATCCTGCGCG CCGACCTGTC CGAGCGCGAC GATAGGTTGC GGGTCGAGCG ACGGTTGCGC GATGACGCCT CGATCGCGTT GCTGGTGAAC AACGCCGGCG TGGCGATGAA CGGTCCGCTG GCCGATGCCG ACATGGACCG GGCGGAGCGG ATGATCGCCC TCAACGTAGT GGCCCTGACC CGCCTGGCTG CCGGTGCGGC GGAGGGGTTC CGCCGGCGTG GCGGCGGCGC CATCGTCAAC CTCGGTTCGG TGGTGGCGCT GGCGCCGGAG TTGTTCAATG CCGTCTATAG CGCGACCAAG GCCTACGTGC TGAGCCTGAG CCAGTCGCTG CAGCACGAGC TGGCCGGCAG CGGCGTTTAC GTCCAGGCGG TGCTGCCCGG CGTCACCCGT ACCGAGATCT GGGAGCGCAG CGGCACCGGA ATCGCCGGGA TTCCCGCGGA GATGGTGATG GAGGTCGAGG ACCTGGTGGA GGCGGCGCTG GTCGGTTTCG ATCGGCGTGA AGCGGTGACC ATCCCGTCGT TGCCGGATGC GGCCGATTGG CAGGCGCTGA TGACGGCGCG GGCCAGGCTC GCGCCCAATC TGTCGCGGCA GCGGCCGGCC GAGCGCTACC TCGGCTGA
|
Protein sequence | MNEQIGNGVA LITGASSGIG ATYAEHLARR GHDLLLVARD RQRLEALADR LRQAHGVRVE ILRADLSERD DRLRVERRLR DDASIALLVN NAGVAMNGPL ADADMDRAER MIALNVVALT RLAAGAAEGF RRRGGGAIVN LGSVVALAPE LFNAVYSATK AYVLSLSQSL QHELAGSGVY VQAVLPGVTR TEIWERSGTG IAGIPAEMVM EVEDLVEAAL VGFDRREAVT IPSLPDAADW QALMTARARL APNLSRQRPA ERYLG
|
| |