More than 300 homologs were found in PanDaTox collection
for query gene Arth_0289 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  100 
 
 
258 aa  526  1e-148  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  70.16 
 
 
263 aa  376  1e-103  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  58.4 
 
 
251 aa  276  2e-73  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  54.88 
 
 
253 aa  256  2e-67  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  53.94 
 
 
250 aa  241  1e-62  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  50.61 
 
 
269 aa  227  2e-58  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  48.52 
 
 
252 aa  217  1e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  48.35 
 
 
269 aa  214  8e-55  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  48.33 
 
 
269 aa  213  1.9999999999999998e-54  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  51.26 
 
 
253 aa  212  4.9999999999999996e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  48.21 
 
 
254 aa  212  5.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  52.12 
 
 
255 aa  209  3e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  51.48 
 
 
269 aa  207  1e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  45.38 
 
 
249 aa  207  2e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  48.73 
 
 
296 aa  201  8e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  48.54 
 
 
259 aa  201  9e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  50.21 
 
 
250 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  45.15 
 
 
249 aa  188  5.999999999999999e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  44.96 
 
 
258 aa  184  1.0000000000000001e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  46.31 
 
 
259 aa  184  2.0000000000000003e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  40.25 
 
 
282 aa  183  3e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  45 
 
 
259 aa  174  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  46.22 
 
 
258 aa  173  1.9999999999999998e-42  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  43.46 
 
 
287 aa  173  2.9999999999999996e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  45.76 
 
 
258 aa  170  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  44.44 
 
 
258 aa  169  6e-41  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  44.44 
 
 
258 aa  169  6e-41  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  44.44 
 
 
258 aa  168  7e-41  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  46.22 
 
 
258 aa  166  2.9999999999999998e-40  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  41.87 
 
 
276 aa  166  2.9999999999999998e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  40.32 
 
 
267 aa  161  1e-38  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  33.33 
 
 
265 aa  158  7e-38  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  32.52 
 
 
265 aa  157  2e-37  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  40.41 
 
 
266 aa  154  1e-36  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  37.76 
 
 
271 aa  153  2e-36  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  38.27 
 
 
266 aa  152  4e-36  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  40.27 
 
 
262 aa  152  5e-36  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  39.82 
 
 
257 aa  151  8e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  39.82 
 
 
262 aa  150  1e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  40.08 
 
 
255 aa  150  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  36.8 
 
 
273 aa  150  1e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  40.27 
 
 
263 aa  149  5e-35  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  39.57 
 
 
258 aa  148  7e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  41.59 
 
 
265 aa  145  5e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  38.5 
 
 
266 aa  145  5e-34  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  38.94 
 
 
281 aa  145  7.0000000000000006e-34  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  38.94 
 
 
281 aa  145  7.0000000000000006e-34  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  37.5 
 
 
259 aa  144  1e-33  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  38.94 
 
 
266 aa  144  1e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  38.46 
 
 
265 aa  143  2e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  37.86 
 
 
258 aa  142  6e-33  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  36.75 
 
 
264 aa  140  1.9999999999999998e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  39.38 
 
 
264 aa  140  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  37.6 
 
 
263 aa  140  1.9999999999999998e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  33.6 
 
 
260 aa  140  3e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  37.61 
 
 
266 aa  139  3.9999999999999997e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  40.87 
 
 
264 aa  139  4.999999999999999e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  35.9 
 
 
270 aa  139  4.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  37.86 
 
 
291 aa  139  6e-32  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  38.2 
 
 
271 aa  139  6e-32  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  35 
 
 
266 aa  138  7.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  38.67 
 
 
264 aa  138  1e-31  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  43.52 
 
 
283 aa  138  1e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  42.37 
 
 
271 aa  136  3.0000000000000003e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  35.47 
 
 
270 aa  136  3.0000000000000003e-31  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  36.56 
 
 
271 aa  136  3.0000000000000003e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  33.61 
 
 
267 aa  135  5e-31  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  36.64 
 
 
266 aa  135  5e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  36.32 
 
 
265 aa  135  6.0000000000000005e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  32.4 
 
 
263 aa  135  7.000000000000001e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  36.74 
 
 
265 aa  135  7.000000000000001e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  38.37 
 
 
266 aa  134  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  35.53 
 
 
256 aa  133  1.9999999999999998e-30  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  34.58 
 
 
266 aa  133  3e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  36 
 
 
266 aa  132  3.9999999999999996e-30  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  33.2 
 
 
272 aa  132  6e-30  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  36.75 
 
 
265 aa  132  7.999999999999999e-30  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  35.71 
 
 
267 aa  131  1.0000000000000001e-29  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.18 
 
 
255 aa  131  1.0000000000000001e-29  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  34.58 
 
 
266 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  34.36 
 
 
267 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  34.82 
 
 
267 aa  130  2.0000000000000002e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  37.26 
 
 
277 aa  130  3e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  34.3 
 
 
263 aa  129  3e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  34.41 
 
 
267 aa  130  3e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  34.41 
 
 
267 aa  130  3e-29  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  33.6 
 
 
258 aa  129  4.0000000000000003e-29  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  37.71 
 
 
270 aa  129  5.0000000000000004e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  35.66 
 
 
259 aa  129  5.0000000000000004e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  33.98 
 
 
262 aa  129  7.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  35.39 
 
 
275 aa  128  8.000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  35.39 
 
 
256 aa  128  9.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  33.73 
 
 
261 aa  127  1.0000000000000001e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  38.05 
 
 
266 aa  128  1.0000000000000001e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  38.38 
 
 
264 aa  128  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  32.93 
 
 
264 aa  126  3e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  34 
 
 
269 aa  126  3e-28  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  39.11 
 
 
262 aa  126  4.0000000000000003e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.68 
 
 
267 aa  126  4.0000000000000003e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  34.57 
 
 
275 aa  125  5e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
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