| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1100 |
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| Symbol | |
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| ID | 5108073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1236598 |
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| End bp | 1237392 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502324 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001186599 |
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| Protein GI | 146306134 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.576998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0165353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG CAAGCAAGCC CGCTACCGCC CTGATCACCG GCGCCTCGTC CGGCATCGGC
GCCACCTACG CCGAGCGCCT GGCCCGGCGT GGTCATGACC TTCTGCTGGT AGCGCGCGAT
GCCCAGCGCC TGCAGGCCCT GGCCGAGCGC CTGGGCGGCG AATATGGCGT CGCCGTCGAG
GTGCTGCCGG CCGACCTGAC GCAGAAGGCC GACATCCTCA AGGTCGCGCA ACGCCTGCGT
GAGGATGCCG GTATTGGCCT GCTGGTGAAC AACGCGGGCG TGGCGATGAA CGGCAAGCTG
GCCGACGCCG ATCTGGAGCA GGCCGAGGCG ATGATCCAGC TCAACGTGGT GGCACTGACC
CACCTGGCGG CTGCGGCTGC GGCCAACTTC TCCGCGGCGG GGCGGGGCGG CATCATCAAC
CTCGGTTCGG TGGTGGCGCT GGCGCCGGAG ATGTTCAACG CCGTGTACAG CGCGACCAAG
GCCTACGTGC TGAGCCTGAC CCAGACCCTG GCCGGTGAGT TGCGAGGTTC TGGAGTGCAG
CTGCAGGCGG TGATGCCGGG CGTGACCCGC ACCGAGATCT GGGAGCGCAG CGGCACCGAC
GCCTCGGCGC TGCCGCCGTC GATGATCATG GAAGTGGGCG AGATGGTCGA CGCGGCGCTG
GCCGGCTTCG ATCAGGGCGA ACTGGTGACC ATACCCTCGC TGCCGGATGC CGCCGACTGG
AACGCCTTCG TCACCGCCCG CGAGGCCTTG TTGCCGAACC TGTCGCGCAA CCAGGCGGCG
GCGCGTTACA AGTGA
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| Protein sequence | MSTASKPATA LITGASSGIG ATYAERLARR GHDLLLVARD AQRLQALAER LGGEYGVAVE
VLPADLTQKA DILKVAQRLR EDAGIGLLVN NAGVAMNGKL ADADLEQAEA MIQLNVVALT
HLAAAAAANF SAAGRGGIIN LGSVVALAPE MFNAVYSATK AYVLSLTQTL AGELRGSGVQ
LQAVMPGVTR TEIWERSGTD ASALPPSMIM EVGEMVDAAL AGFDQGELVT IPSLPDAADW
NAFVTAREAL LPNLSRNQAA ARYK
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