More than 300 homologs were found in PanDaTox collection
for query gene Daci_5779 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  100 
 
 
268 aa  532  1e-150  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  62.35 
 
 
263 aa  302  3.0000000000000004e-81  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  57.63 
 
 
267 aa  291  7e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  47.1 
 
 
266 aa  217  1e-55  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  46.95 
 
 
281 aa  216  2.9999999999999998e-55  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  46.95 
 
 
281 aa  216  2.9999999999999998e-55  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  46.48 
 
 
266 aa  216  4e-55  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  46.56 
 
 
266 aa  214  8e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  46.36 
 
 
271 aa  214  9.999999999999999e-55  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  46.56 
 
 
266 aa  214  9.999999999999999e-55  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  44.83 
 
 
266 aa  214  9.999999999999999e-55  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  47.73 
 
 
271 aa  213  1.9999999999999998e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  48.28 
 
 
262 aa  213  1.9999999999999998e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  46.21 
 
 
271 aa  213  1.9999999999999998e-54  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  48.66 
 
 
262 aa  213  1.9999999999999998e-54  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  46.15 
 
 
265 aa  214  1.9999999999999998e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  46.56 
 
 
266 aa  213  2.9999999999999995e-54  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  47.71 
 
 
266 aa  211  7e-54  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  44.79 
 
 
266 aa  211  1e-53  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  45.77 
 
 
270 aa  210  2e-53  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  44.4 
 
 
269 aa  210  2e-53  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  46.92 
 
 
265 aa  209  3e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  47.51 
 
 
263 aa  206  2e-52  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  45.35 
 
 
270 aa  207  2e-52  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  43.89 
 
 
266 aa  207  2e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  46.77 
 
 
266 aa  206  3e-52  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  46.72 
 
 
270 aa  204  8e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  43.89 
 
 
264 aa  203  2e-51  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  45.38 
 
 
266 aa  203  3e-51  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  41.79 
 
 
285 aa  203  3e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  45.77 
 
 
265 aa  203  3e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  43.23 
 
 
269 aa  202  4e-51  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  44.02 
 
 
264 aa  198  7e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  45.63 
 
 
270 aa  194  1e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  42.08 
 
 
269 aa  193  2e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  46.18 
 
 
266 aa  192  5e-48  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  42.02 
 
 
265 aa  191  1e-47  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  44.4 
 
 
264 aa  188  9e-47  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  43.97 
 
 
264 aa  183  3e-45  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  46.12 
 
 
269 aa  183  3e-45  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  42.75 
 
 
269 aa  182  4.0000000000000006e-45  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  43.09 
 
 
262 aa  181  2e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  39.31 
 
 
267 aa  180  2.9999999999999997e-44  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  44.03 
 
 
283 aa  179  4e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  42.64 
 
 
265 aa  177  1e-43  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  39.84 
 
 
257 aa  177  2e-43  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  35.88 
 
 
260 aa  170  2e-41  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  40 
 
 
265 aa  169  3e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  40.08 
 
 
269 aa  169  3e-41  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  39.22 
 
 
262 aa  167  2e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  40.86 
 
 
262 aa  167  2e-40  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  40.86 
 
 
262 aa  167  2e-40  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  41.76 
 
 
262 aa  165  5.9999999999999996e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  36.64 
 
 
261 aa  165  5.9999999999999996e-40  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  37.74 
 
 
260 aa  165  9e-40  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  40.23 
 
 
287 aa  165  9e-40  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  37.21 
 
 
260 aa  162  7e-39  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  39.85 
 
 
264 aa  161  1e-38  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  45.08 
 
 
262 aa  161  1e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  39.46 
 
 
264 aa  160  2e-38  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  40.17 
 
 
271 aa  157  2e-37  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  48.09 
 
 
264 aa  155  4e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  42.99 
 
 
258 aa  153  2.9999999999999998e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  39.83 
 
 
266 aa  146  3e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  39.83 
 
 
262 aa  145  7.0000000000000006e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  38.8 
 
 
296 aa  145  9e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  41.74 
 
 
273 aa  144  1e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  40.36 
 
 
253 aa  142  8e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  38.67 
 
 
268 aa  138  1e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  39.82 
 
 
258 aa  136  3.0000000000000003e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  39.82 
 
 
291 aa  136  4e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  40.41 
 
 
199 aa  135  7.000000000000001e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  35.91 
 
 
255 aa  135  8e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  38.67 
 
 
258 aa  134  9.999999999999999e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  41.15 
 
 
259 aa  135  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  36.94 
 
 
260 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  38.94 
 
 
259 aa  131  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  39.65 
 
 
250 aa  131  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  36.48 
 
 
261 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  36.32 
 
 
269 aa  130  2.0000000000000002e-29  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  40.09 
 
 
262 aa  130  3e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  39.11 
 
 
266 aa  130  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  38.22 
 
 
264 aa  130  3e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  45.7 
 
 
268 aa  129  6e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  38.16 
 
 
269 aa  129  6e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  37.66 
 
 
255 aa  129  7.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  38.33 
 
 
269 aa  128  8.000000000000001e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  40.26 
 
 
255 aa  128  8.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  36.05 
 
 
261 aa  128  9.000000000000001e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.77 
 
 
258 aa  128  1.0000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  38.29 
 
 
264 aa  128  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.67 
 
 
266 aa  127  1.0000000000000001e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  43.48 
 
 
256 aa  127  2.0000000000000002e-28  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  37.45 
 
 
267 aa  127  2.0000000000000002e-28  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  39.62 
 
 
260 aa  126  3e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  40.27 
 
 
250 aa  126  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  35.43 
 
 
269 aa  126  3e-28  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  39.74 
 
 
276 aa  126  3e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  38.5 
 
 
259 aa  126  4.0000000000000003e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  36.28 
 
 
258 aa  126  4.0000000000000003e-28  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
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