Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0523 |
Symbol | |
ID | 5452185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 578481 |
End bp | 579248 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640874272 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001410043 |
Protein GI | 154249218 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAATT ATAATTTAAA AAGGCATCAT TGGGCACTTA TAACTGGTGC TTCTTCTGGT ATTGGAAAGG AATTCGCTTT TCAAATCGCG GAGAAAGGTT TAAACGTTAT AATCTTAGGA AGGAACGCTG AGCAACTGAG TAAAGTAGCT GATGAAATTC ACAACGCAAC AAATTCCAGT GTTGTTATTA TCCAAGCAGA CCTCGTTAAA GAGTTGGATA GTGTGCTTGA AAACCTTTCA AGATTCGATG TCGACCTTCT TGTGAACAAC GCTGGTATAG GTCTGTACGG TGATTTCATA CAACATAGCT GGGAAGAATA CGAAAATATG ATGAAATTGA ACATGGAAGT ACTAACAAAA CTTTCTCATC ATTACGCAAA AAAATTCGTG AAAAAAGGTT TTGGAGGAAT AATTAACGTA GCTTCCGTTG CTGGTTTCAT GCCTATTCCA CATTTTGCGG TTTACGGTGC AACGAAAGCT TACGTTTACA GCTTCTCAAT GAGCCTTTGG GCGGAACTAA AAGATAAAGG TATACACGTA CTTTGCGTCG CGCCTGGAAA GACGGAAACA AAATTTTTCG AAAGGGCAAA AATGGATCCC GGTAAACAAT TAATGAAACC GAGCGAAGTT GTTAGAGGAG CTCTAAATGC TTACGAAAAA GGTTCTCCAT TGTATATACC CGGTGTATCA AATAAACTAA TTTACCACTT TGTTAGACGA TTCTTTAGTG ATAAATTCGT TGCAAAGATG CTTGTTAAAT ACTTTTAA
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Protein sequence | MLNYNLKRHH WALITGASSG IGKEFAFQIA EKGLNVIILG RNAEQLSKVA DEIHNATNSS VVIIQADLVK ELDSVLENLS RFDVDLLVNN AGIGLYGDFI QHSWEEYENM MKLNMEVLTK LSHHYAKKFV KKGFGGIINV ASVAGFMPIP HFAVYGATKA YVYSFSMSLW AELKDKGIHV LCVAPGKTET KFFERAKMDP GKQLMKPSEV VRGALNAYEK GSPLYIPGVS NKLIYHFVRR FFSDKFVAKM LVKYF
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