Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0082 |
Symbol | |
ID | 4082057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 86908 |
End bp | 87717 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008443 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_615141 |
Protein GI | 103485580 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAG CAAAGGGCAC TGCCCTCATC ACTGGCGGCT CCACCGGAAT CGGTGCGATC TATGCCGACC GCCTGGCGCG CCAAGGATAT GATCTGATCC TGGTTGCGCG CAACGCCGCA AAGCTGGATC AGGTCGCCGC AACCATTCGC ACAGCCACCG GTCGCAATGT CGACACCGTG CCCGCCGACC TCTCCAATCC CGGCGAGCTG CGCCTGATCG AAGCGCGCCT CATCAACGAT CGCCGCATCA CGATGCTGGT CAACAATGCG GGTATCGGCG CGCCGGTCCC GACGTGGCAG GCCGACATCG ATCAGATGGA ATCAATGATC GACATCAATG CGACCGCGCT CGCCCGGCTG ACCTATGCCG TCGCCCAGCG TTTTGCTGCA GCCGGCAACG GCACGATCAT CAACATCGCA TCGACCGTCG CGATCGCCCC CGAGTTCATG CTCAACGGCG TCTACGGCGC GACCAAGGCC TTCGTCGTGG CGCTCACGGC TTCGCTGCAC GCCGAGCTCG CCGACAAGGG CGTCCGCGTC CAGGTTGTCC TGCCCGGCGC GACGGCGACC GAATTCTGGG ACCTGTCGGG TGTGCCGCTG TCCGGCGTCC CCGCCGAGAT CGTGATGTCG GCCGACGCCA TGGTCGACGC GGCGCTCGCC GGTCTCGAAC TTGGCGAGAC CGTCACCATT CCCGCGCTCC CCGATGCCGC TGAGTGGACC GCGTTCGAAG CGGCCCGGAC CGCGATGCTC CCCAATCTGT CGCTGACCAA CCCGGCCGAT CGATATCGGG CCGTTGCCGC CGCCGCTTGA
|
Protein sequence | MNEAKGTALI TGGSTGIGAI YADRLARQGY DLILVARNAA KLDQVAATIR TATGRNVDTV PADLSNPGEL RLIEARLIND RRITMLVNNA GIGAPVPTWQ ADIDQMESMI DINATALARL TYAVAQRFAA AGNGTIINIA STVAIAPEFM LNGVYGATKA FVVALTASLH AELADKGVRV QVVLPGATAT EFWDLSGVPL SGVPAEIVMS ADAMVDAALA GLELGETVTI PALPDAAEWT AFEAARTAML PNLSLTNPAD RYRAVAAAA
|
| |