Gene Sala_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0082 
Symbol 
ID4082057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp86908 
End bp87717 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID638008443 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_615141 
Protein GI103485580 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAG CAAAGGGCAC TGCCCTCATC ACTGGCGGCT CCACCGGAAT CGGTGCGATC 
TATGCCGACC GCCTGGCGCG CCAAGGATAT GATCTGATCC TGGTTGCGCG CAACGCCGCA
AAGCTGGATC AGGTCGCCGC AACCATTCGC ACAGCCACCG GTCGCAATGT CGACACCGTG
CCCGCCGACC TCTCCAATCC CGGCGAGCTG CGCCTGATCG AAGCGCGCCT CATCAACGAT
CGCCGCATCA CGATGCTGGT CAACAATGCG GGTATCGGCG CGCCGGTCCC GACGTGGCAG
GCCGACATCG ATCAGATGGA ATCAATGATC GACATCAATG CGACCGCGCT CGCCCGGCTG
ACCTATGCCG TCGCCCAGCG TTTTGCTGCA GCCGGCAACG GCACGATCAT CAACATCGCA
TCGACCGTCG CGATCGCCCC CGAGTTCATG CTCAACGGCG TCTACGGCGC GACCAAGGCC
TTCGTCGTGG CGCTCACGGC TTCGCTGCAC GCCGAGCTCG CCGACAAGGG CGTCCGCGTC
CAGGTTGTCC TGCCCGGCGC GACGGCGACC GAATTCTGGG ACCTGTCGGG TGTGCCGCTG
TCCGGCGTCC CCGCCGAGAT CGTGATGTCG GCCGACGCCA TGGTCGACGC GGCGCTCGCC
GGTCTCGAAC TTGGCGAGAC CGTCACCATT CCCGCGCTCC CCGATGCCGC TGAGTGGACC
GCGTTCGAAG CGGCCCGGAC CGCGATGCTC CCCAATCTGT CGCTGACCAA CCCGGCCGAT
CGATATCGGG CCGTTGCCGC CGCCGCTTGA
 
Protein sequence
MNEAKGTALI TGGSTGIGAI YADRLARQGY DLILVARNAA KLDQVAATIR TATGRNVDTV 
PADLSNPGEL RLIEARLIND RRITMLVNNA GIGAPVPTWQ ADIDQMESMI DINATALARL
TYAVAQRFAA AGNGTIINIA STVAIAPEFM LNGVYGATKA FVVALTASLH AELADKGVRV
QVVLPGATAT EFWDLSGVPL SGVPAEIVMS ADAMVDAALA GLELGETVTI PALPDAAEWT
AFEAARTAML PNLSLTNPAD RYRAVAAAA