More than 300 homologs were found in PanDaTox collection
for query gene PSPA7_5551 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  100 
 
 
265 aa  515  1.0000000000000001e-145  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  89.06 
 
 
265 aa  457  9.999999999999999e-129  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  70.98 
 
 
264 aa  343  2e-93  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  67.3 
 
 
264 aa  327  9e-89  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  60.55 
 
 
265 aa  309  2.9999999999999997e-83  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  59.33 
 
 
271 aa  303  1.0000000000000001e-81  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  58.17 
 
 
270 aa  300  1e-80  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  57.03 
 
 
270 aa  296  2e-79  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  59.85 
 
 
269 aa  286  2.9999999999999996e-76  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  57.41 
 
 
271 aa  283  1.0000000000000001e-75  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  57.74 
 
 
266 aa  279  3e-74  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  55.64 
 
 
266 aa  275  5e-73  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  55.64 
 
 
281 aa  274  1.0000000000000001e-72  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  56.42 
 
 
266 aa  274  1.0000000000000001e-72  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  55.64 
 
 
281 aa  274  1.0000000000000001e-72  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  55.64 
 
 
266 aa  273  2.0000000000000002e-72  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  55.64 
 
 
266 aa  270  2e-71  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  58.89 
 
 
262 aa  269  2.9999999999999997e-71  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  58.5 
 
 
262 aa  267  1e-70  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  56.52 
 
 
260 aa  267  1e-70  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  58.5 
 
 
264 aa  266  4e-70  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  58.1 
 
 
262 aa  265  5e-70  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  58.5 
 
 
264 aa  265  8e-70  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  54.62 
 
 
267 aa  264  1e-69  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  52.51 
 
 
269 aa  263  2e-69  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  51.72 
 
 
266 aa  263  2e-69  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  54.47 
 
 
265 aa  263  2e-69  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  56.92 
 
 
262 aa  262  3e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  54.55 
 
 
260 aa  261  8e-69  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  51.71 
 
 
270 aa  260  2e-68  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  56.92 
 
 
262 aa  259  3e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  53.91 
 
 
266 aa  256  3e-67  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  52.53 
 
 
264 aa  256  3e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  51.95 
 
 
285 aa  255  5e-67  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  52.96 
 
 
260 aa  254  1.0000000000000001e-66  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  52.14 
 
 
269 aa  254  1.0000000000000001e-66  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  56.2 
 
 
271 aa  250  2e-65  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  50.77 
 
 
265 aa  246  2e-64  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  50.38 
 
 
269 aa  246  2e-64  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  50.79 
 
 
257 aa  247  2e-64  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  53.28 
 
 
262 aa  245  4.9999999999999997e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  58.89 
 
 
262 aa  244  9.999999999999999e-64  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  53.31 
 
 
263 aa  243  1.9999999999999999e-63  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  52.53 
 
 
266 aa  243  1.9999999999999999e-63  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  53.75 
 
 
287 aa  243  1.9999999999999999e-63  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  53.28 
 
 
262 aa  243  3e-63  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  51.78 
 
 
261 aa  242  3.9999999999999997e-63  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  56.25 
 
 
269 aa  239  4e-62  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  50.19 
 
 
270 aa  235  4e-61  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  48.64 
 
 
265 aa  234  1.0000000000000001e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  46.69 
 
 
266 aa  220  9.999999999999999e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  46.01 
 
 
266 aa  218  8.999999999999998e-56  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  46.77 
 
 
266 aa  215  5e-55  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  58.75 
 
 
264 aa  214  9.999999999999999e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  45.25 
 
 
266 aa  209  4e-53  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  47.29 
 
 
267 aa  207  1e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  45.74 
 
 
264 aa  204  2e-51  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  46.92 
 
 
268 aa  200  1.9999999999999998e-50  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  46.29 
 
 
269 aa  187  1e-46  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  44.96 
 
 
263 aa  184  9e-46  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  49.23 
 
 
199 aa  183  2.0000000000000003e-45  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  41.02 
 
 
296 aa  165  6.9999999999999995e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  43.48 
 
 
255 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  41.06 
 
 
253 aa  157  2e-37  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  42.29 
 
 
283 aa  156  3e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  43.42 
 
 
253 aa  155  9e-37  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  41.7 
 
 
269 aa  153  2.9999999999999998e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  40.08 
 
 
259 aa  150  3e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  39.01 
 
 
269 aa  149  4e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  40.79 
 
 
267 aa  149  6e-35  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  41.52 
 
 
252 aa  148  8e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  39.01 
 
 
269 aa  148  1.0000000000000001e-34  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  42.29 
 
 
249 aa  147  2.0000000000000003e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  40.71 
 
 
250 aa  145  1e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  43.56 
 
 
250 aa  143  3e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.67 
 
 
266 aa  142  4e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  42.86 
 
 
258 aa  141  9e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  39.01 
 
 
271 aa  141  9.999999999999999e-33  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  43.75 
 
 
263 aa  141  9.999999999999999e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  38.49 
 
 
276 aa  141  9.999999999999999e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  40.27 
 
 
258 aa  141  9.999999999999999e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  44.49 
 
 
287 aa  140  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.4 
 
 
255 aa  140  1.9999999999999998e-32  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  44.39 
 
 
264 aa  140  1.9999999999999998e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  40.27 
 
 
269 aa  140  1.9999999999999998e-32  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  39.82 
 
 
258 aa  139  3e-32  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  39.82 
 
 
258 aa  139  3e-32  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  46.67 
 
 
271 aa  139  3.9999999999999997e-32  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  37.7 
 
 
249 aa  139  4.999999999999999e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  42.04 
 
 
259 aa  139  6e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  38.28 
 
 
266 aa  138  8.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  40.43 
 
 
259 aa  135  6.0000000000000005e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  36.74 
 
 
258 aa  135  7.000000000000001e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  37.04 
 
 
262 aa  133  1.9999999999999998e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  40.11 
 
 
261 aa  132  6e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  38.3 
 
 
259 aa  132  6e-30  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  37.78 
 
 
262 aa  132  7.999999999999999e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  40.98 
 
 
254 aa  131  9e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  39.57 
 
 
261 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  39.38 
 
 
258 aa  131  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
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