Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1352 |
Symbol | |
ID | 9138046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1724685 |
End bp | 1725500 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003629385 |
Protein GI | 296121607 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.708878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGCGAC TGGCAGACAT GAATGATCGC TGGGCCCTGG TCACTGGTGC ATCGTCCGGC ATTGGTGCTG AGTTCGCACG TCAATTGGCT GCCCGGGGGA TGCATCTGAT TCTGGTGGCA CGCCGCACGG AGATGATGCA GGGGCTGGCT GCGGAACTCG ATCGATTGCA TGGAACCAAA ACCGAAATTC TTTCGATTGA TCTGACGTTG GCTGATGCGG TTCAACAGAT TGCTGACAAA GTTTCTGCTG CCGGGATCGA GGTCGATTTG CTGGTGAACT GTGCTGGTTT TGGCATGGTA GGCGAAATTC TGGAGACAGA CTTTGACCGT GTGCGTCAAA TGTTACGTCT GAACATCGAG GCCTTAGCAG CTTTGACGTA CCAGTTTCTG CCAGGGATGA TTCGCCGAAA TCGTGGTGCC GTTGTCAACG TGGCTTCGAT TGCTGCTTTC CAACCAGTGG CTTACATGGG AGCTTACGCT GCGAGCAAGG CGTTTGTGCT ACATTTTACT GAGGCCTTAC ATGCCGAGCT TTCGGATACC GGTGTGGTCG CGATGGCTGT CTGTCCGGGA GTGACCCAGA CCGATTTTTT CGATGTGGCT GGTGCCACGG GCTGGCTGCA GAAACATTCG TCGCAAACAC CTGAGGAAGT TGTCCGTCAG GCCCTGAAAT CGCTGGATCG TGGTCGTCAG TATGTGGTTA CCGGCTGGCG GAACTATCTT TTGACGTGCC TGGTACGGAT CGCGACTCGC TGGCGTGTGG TCAATGAATC CAAACGGTTC TTCCGCCCCA GACGTTCGAA TAAGTCCAAG AGCTGA
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Protein sequence | MPRLADMNDR WALVTGASSG IGAEFARQLA ARGMHLILVA RRTEMMQGLA AELDRLHGTK TEILSIDLTL ADAVQQIADK VSAAGIEVDL LVNCAGFGMV GEILETDFDR VRQMLRLNIE ALAALTYQFL PGMIRRNRGA VVNVASIAAF QPVAYMGAYA ASKAFVLHFT EALHAELSDT GVVAMAVCPG VTQTDFFDVA GATGWLQKHS SQTPEEVVRQ ALKSLDRGRQ YVVTGWRNYL LTCLVRIATR WRVVNESKRF FRPRRSNKSK S
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