Gene Pfl01_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4040 
Symbol 
ID3713891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4565842 
End bp4566636 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_349768 
Protein GI77460261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.128419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.923094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCC CGAAATCCCA AGGCACGGCG CTGGTCACCG GCGCTTCTTC CGGCATCGGT 
GCGGTGTATG CCGAGCGATT GGCGGCACGT GGTTTTGACC TGTTGCTGGT GGCTCGCGAT
CAGGAGCGTC TGGAGTCCGC GGCCAGTAAG CTGCGAGACG CACATGGCGT TCAGGTCGAA
GTGCTGAAGG CCGACCTGAC GCAAAAGGGT GAAGTGCTCA AGCTTGAACA ACGTCTGCGC
AGCGATTCCA GTATCAGCCT GCTGGTCAAC AATGCGGGCG TAGCGGTCAA TGGCTTGTTG
GCTAATGCCG ACCCCGAGAC CCTGGAGCAA CTGATCCAGT TGAACGTCAC CACGCTGACC
CGACTGGCAG CCGCAGCCGC CTCGGCGTTC ACCCGCGCCG GGCGCGGCAC GATCATCAAT
ATCGCGTCCG TGGTCGCACT GTTCCCCGAA CGCTTCAACG CCACCTACAG CGCCAGCAAG
GCTTACGTGT TGAGTCTGAC TCAATCGCTC AATACCGAAC TCGAAGGCAC CGGGGTCAAG
GTGCAAGCGG TATTGCCCGG TGTGACCCGC ACTGAAATCT GGGAGCGTTC CGGATTCGAT
GCCAGCGGTA TCCCTGCGGA GATGGTCATG GAGGCGGGCG AGATGGTCGA TGCCGCGCTG
TCCGGTCTGG ATCAGGGCGA ACTGGTCACG ATTCCTTCGC TGCCCGATGC GGGCGAGTGG
CAAGCCTTTG TCGCCGCCCG CCATGTAATG GCGCCCAACC TGTCCCACAG TTCGGCGGCC
AGCCGCTACA AGTAA
 
Protein sequence
MNSPKSQGTA LVTGASSGIG AVYAERLAAR GFDLLLVARD QERLESAASK LRDAHGVQVE 
VLKADLTQKG EVLKLEQRLR SDSSISLLVN NAGVAVNGLL ANADPETLEQ LIQLNVTTLT
RLAAAAASAF TRAGRGTIIN IASVVALFPE RFNATYSASK AYVLSLTQSL NTELEGTGVK
VQAVLPGVTR TEIWERSGFD ASGIPAEMVM EAGEMVDAAL SGLDQGELVT IPSLPDAGEW
QAFVAARHVM APNLSHSSAA SRYK