More than 300 homologs were found in PanDaTox collection
for query gene Xaut_1294 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  528  1e-149  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  71.71 
 
 
264 aa  373  1e-102  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  70.93 
 
 
270 aa  363  2e-99  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  71.71 
 
 
263 aa  351  8e-96  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  70.77 
 
 
262 aa  347  2e-94  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  70 
 
 
262 aa  345  5e-94  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  64.86 
 
 
266 aa  328  7e-89  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  65.37 
 
 
266 aa  327  9e-89  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  64.34 
 
 
281 aa  326  2.0000000000000001e-88  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  64.34 
 
 
281 aa  326  2.0000000000000001e-88  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  64.09 
 
 
266 aa  323  2e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  63.71 
 
 
266 aa  322  3e-87  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  62.93 
 
 
266 aa  318  7.999999999999999e-86  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  61.09 
 
 
265 aa  317  2e-85  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  60.54 
 
 
271 aa  312  2.9999999999999996e-84  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  60.15 
 
 
285 aa  308  5.9999999999999995e-83  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  59.54 
 
 
270 aa  305  4.0000000000000004e-82  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  60.46 
 
 
270 aa  305  5.0000000000000004e-82  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  61.48 
 
 
271 aa  303  2.0000000000000002e-81  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  65.66 
 
 
269 aa  302  4.0000000000000003e-81  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  58.53 
 
 
265 aa  299  4e-80  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  61.33 
 
 
266 aa  297  9e-80  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  62.89 
 
 
266 aa  296  2e-79  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  56.15 
 
 
265 aa  289  3e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  59.47 
 
 
269 aa  288  5.0000000000000004e-77  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  55.51 
 
 
269 aa  285  5.999999999999999e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  54.37 
 
 
269 aa  280  2e-74  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  51.74 
 
 
265 aa  271  1e-71  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  57.3 
 
 
270 aa  271  1e-71  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  58.53 
 
 
271 aa  266  2e-70  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  52.53 
 
 
265 aa  259  2e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  51.36 
 
 
265 aa  253  2.0000000000000002e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  50.39 
 
 
260 aa  253  3e-66  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  51.16 
 
 
264 aa  250  1e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  50.97 
 
 
264 aa  249  3e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  50.38 
 
 
262 aa  247  1e-64  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  50 
 
 
262 aa  245  4e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  48.46 
 
 
260 aa  245  6e-64  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  63.96 
 
 
199 aa  244  9.999999999999999e-64  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  45.21 
 
 
266 aa  242  3.9999999999999997e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  47.69 
 
 
266 aa  242  3.9999999999999997e-63  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  47.73 
 
 
262 aa  239  2.9999999999999997e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  49.62 
 
 
262 aa  238  9e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  48.08 
 
 
264 aa  236  2e-61  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  48.08 
 
 
264 aa  236  2e-61  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  47.88 
 
 
266 aa  235  6e-61  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  47.88 
 
 
266 aa  234  1.0000000000000001e-60  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  46.59 
 
 
262 aa  233  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  45.98 
 
 
264 aa  233  2.0000000000000002e-60  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  48.46 
 
 
287 aa  230  2e-59  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  48.84 
 
 
269 aa  227  1e-58  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  44.57 
 
 
261 aa  228  1e-58  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  43.8 
 
 
260 aa  228  1e-58  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  49.62 
 
 
262 aa  221  7e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  46.67 
 
 
267 aa  219  5e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  43.94 
 
 
267 aa  217  1e-55  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  45.95 
 
 
269 aa  216  4e-55  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  43.75 
 
 
257 aa  205  6e-52  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  46.18 
 
 
268 aa  187  2e-46  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  43.08 
 
 
263 aa  184  1.0000000000000001e-45  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  52.14 
 
 
264 aa  184  2.0000000000000003e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  43.01 
 
 
283 aa  182  5.0000000000000004e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  44.05 
 
 
259 aa  172  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  42.86 
 
 
296 aa  167  2e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  43.61 
 
 
253 aa  159  3e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  41.41 
 
 
258 aa  156  3e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.3 
 
 
266 aa  153  2e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  43.65 
 
 
258 aa  154  2e-36  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  41.74 
 
 
267 aa  153  2.9999999999999998e-36  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  42.04 
 
 
249 aa  153  2.9999999999999998e-36  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  41.28 
 
 
253 aa  152  5.9999999999999996e-36  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  39.3 
 
 
266 aa  151  1e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  39.06 
 
 
255 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  40.27 
 
 
250 aa  150  3e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  39.22 
 
 
262 aa  148  9e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  41.85 
 
 
250 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  37.73 
 
 
260 aa  147  2.0000000000000003e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  39.27 
 
 
271 aa  147  2.0000000000000003e-34  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.56 
 
 
252 aa  147  2.0000000000000003e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.89 
 
 
261 aa  145  8.000000000000001e-34  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  38.16 
 
 
269 aa  144  2e-33  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  37.44 
 
 
261 aa  142  5e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  37.07 
 
 
264 aa  142  6e-33  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  41.08 
 
 
264 aa  142  6e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  37.72 
 
 
255 aa  140  9.999999999999999e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  39.47 
 
 
269 aa  141  9.999999999999999e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  39.74 
 
 
269 aa  140  1.9999999999999998e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  37.28 
 
 
269 aa  140  1.9999999999999998e-32  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  43.59 
 
 
263 aa  139  4.999999999999999e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  39.08 
 
 
264 aa  138  7.999999999999999e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  37.89 
 
 
282 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  38.86 
 
 
255 aa  136  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  37.72 
 
 
258 aa  136  4e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  36.09 
 
 
263 aa  135  5e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  36.33 
 
 
259 aa  135  5e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  41.67 
 
 
254 aa  135  6.0000000000000005e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  30.96 
 
 
259 aa  135  7.000000000000001e-31  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  36.14 
 
 
262 aa  135  8e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  32.89 
 
 
265 aa  135  8e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  38.49 
 
 
266 aa  134  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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