More than 300 homologs were found in PanDaTox collection
for query gene Gdia_0995 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  100 
 
 
267 aa  533  1e-150  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  54.62 
 
 
265 aa  264  1e-69  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  51.34 
 
 
270 aa  263  2e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  54.72 
 
 
265 aa  259  4e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  50.38 
 
 
266 aa  254  9e-67  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  51.15 
 
 
266 aa  254  1.0000000000000001e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  50 
 
 
265 aa  253  2.0000000000000002e-66  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  50.95 
 
 
262 aa  253  2.0000000000000002e-66  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  52.09 
 
 
262 aa  251  6e-66  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  53.05 
 
 
264 aa  251  7e-66  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  50.38 
 
 
266 aa  251  9.000000000000001e-66  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  52.47 
 
 
262 aa  251  9.000000000000001e-66  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  53.05 
 
 
264 aa  251  1e-65  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  50 
 
 
266 aa  251  1e-65  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  50 
 
 
281 aa  250  2e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  50 
 
 
281 aa  250  2e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  49.43 
 
 
270 aa  249  4e-65  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  51.53 
 
 
266 aa  249  4e-65  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  51.33 
 
 
262 aa  248  8e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  49.62 
 
 
266 aa  247  2e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  50.59 
 
 
257 aa  246  3e-64  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  49.03 
 
 
271 aa  244  8e-64  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  49.03 
 
 
260 aa  243  1.9999999999999999e-63  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  51.17 
 
 
261 aa  243  3e-63  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  51.15 
 
 
287 aa  242  5e-63  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  49.61 
 
 
260 aa  241  1e-62  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  48.47 
 
 
264 aa  239  2.9999999999999997e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  50.38 
 
 
262 aa  239  4e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  47.91 
 
 
265 aa  238  5e-62  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  48.86 
 
 
271 aa  235  5.0000000000000005e-61  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  52.9 
 
 
266 aa  234  1.0000000000000001e-60  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  47.1 
 
 
260 aa  233  3e-60  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  50 
 
 
271 aa  233  3e-60  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  49.63 
 
 
270 aa  230  2e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  50.19 
 
 
264 aa  229  5e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  47.73 
 
 
266 aa  228  1e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  50.97 
 
 
262 aa  228  1e-58  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  49.42 
 
 
269 aa  226  2e-58  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  46.79 
 
 
265 aa  224  8e-58  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  44.87 
 
 
285 aa  222  6e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  47.89 
 
 
270 aa  220  1.9999999999999999e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  43.73 
 
 
269 aa  219  3e-56  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  45.28 
 
 
265 aa  219  3.9999999999999997e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  47.88 
 
 
266 aa  218  7e-56  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  43.35 
 
 
269 aa  218  7e-56  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  43.35 
 
 
264 aa  218  1e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  46.54 
 
 
266 aa  216  2e-55  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  48.08 
 
 
266 aa  216  2.9999999999999998e-55  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  50.57 
 
 
269 aa  213  2.9999999999999995e-54  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  46.72 
 
 
262 aa  213  3.9999999999999995e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  46.72 
 
 
262 aa  209  3e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  45.56 
 
 
263 aa  206  2e-52  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  42.8 
 
 
269 aa  205  6e-52  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  43.94 
 
 
266 aa  202  6e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  44.83 
 
 
267 aa  201  9.999999999999999e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  43.13 
 
 
264 aa  198  7.999999999999999e-50  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  50.38 
 
 
264 aa  181  1e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  40.82 
 
 
269 aa  171  7.999999999999999e-42  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  39.31 
 
 
268 aa  168  9e-41  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  39.54 
 
 
263 aa  168  9e-41  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  41.54 
 
 
199 aa  157  2e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  39.91 
 
 
269 aa  151  1e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  39.21 
 
 
269 aa  147  2.0000000000000003e-34  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  40.62 
 
 
252 aa  143  3e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  40.93 
 
 
259 aa  142  7e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  39.22 
 
 
296 aa  142  8e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  37.05 
 
 
283 aa  141  9e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  40.27 
 
 
253 aa  141  9.999999999999999e-33  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  41.59 
 
 
255 aa  136  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  38.63 
 
 
263 aa  136  4e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  41.7 
 
 
254 aa  136  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  39.65 
 
 
249 aa  135  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  33.62 
 
 
255 aa  134  9.999999999999999e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  40.81 
 
 
253 aa  134  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  37.33 
 
 
251 aa  131  1.0000000000000001e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  35.71 
 
 
258 aa  131  1.0000000000000001e-29  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  44.86 
 
 
258 aa  129  6e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  36.44 
 
 
250 aa  128  9.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  38.33 
 
 
269 aa  127  1.0000000000000001e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  39.39 
 
 
258 aa  127  2.0000000000000002e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  36.56 
 
 
269 aa  126  3e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  39.74 
 
 
250 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.56 
 
 
266 aa  123  3e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  37 
 
 
266 aa  122  6e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  37.5 
 
 
259 aa  120  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  35.43 
 
 
249 aa  120  1.9999999999999998e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  35.56 
 
 
262 aa  119  4.9999999999999996e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  39.38 
 
 
259 aa  119  7e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  31.69 
 
 
263 aa  118  9.999999999999999e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  44.16 
 
 
271 aa  117  1.9999999999999998e-25  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  44.72 
 
 
265 aa  117  1.9999999999999998e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  42.25 
 
 
255 aa  117  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  40.5 
 
 
267 aa  117  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  37.24 
 
 
258 aa  117  1.9999999999999998e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  37.97 
 
 
258 aa  117  1.9999999999999998e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  37.24 
 
 
258 aa  116  3.9999999999999997e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  39.36 
 
 
276 aa  116  3.9999999999999997e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  37.24 
 
 
258 aa  116  3.9999999999999997e-25  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  30.86 
 
 
271 aa  115  1.0000000000000001e-24  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  39.9 
 
 
258 aa  114  2.0000000000000002e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
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