More than 300 homologs were found in PanDaTox collection
for query gene Namu_5163 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  100 
 
 
258 aa  513  1e-144  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  51.55 
 
 
259 aa  243  3e-63  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  52.34 
 
 
258 aa  229  4e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  50.78 
 
 
258 aa  216  4e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  48.15 
 
 
269 aa  209  3e-53  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  48.25 
 
 
253 aa  207  1e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  46.67 
 
 
269 aa  207  1e-52  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  48.63 
 
 
252 aa  207  2e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  48.05 
 
 
258 aa  207  2e-52  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  47.66 
 
 
258 aa  205  6e-52  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  47.66 
 
 
258 aa  205  6e-52  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  46.67 
 
 
250 aa  203  3e-51  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  49.39 
 
 
254 aa  203  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  44.21 
 
 
263 aa  188  9e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  45.28 
 
 
253 aa  185  6e-46  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  44.96 
 
 
258 aa  184  1.0000000000000001e-45  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  42.39 
 
 
249 aa  182  4.0000000000000006e-45  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  45.53 
 
 
269 aa  182  5.0000000000000004e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  41.43 
 
 
249 aa  180  2e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  45.88 
 
 
250 aa  178  5.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  43.36 
 
 
255 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  42.8 
 
 
251 aa  176  3e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  47.11 
 
 
259 aa  176  5e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  42.8 
 
 
269 aa  174  9.999999999999999e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  42.51 
 
 
276 aa  168  8e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  40.8 
 
 
282 aa  167  1e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  42.62 
 
 
296 aa  166  2e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  44.44 
 
 
258 aa  158  7e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  41.44 
 
 
277 aa  156  3e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  39.65 
 
 
257 aa  156  3e-37  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  39.31 
 
 
266 aa  153  2e-36  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  43.8 
 
 
258 aa  151  1e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  49.73 
 
 
255 aa  149  3e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  40.93 
 
 
259 aa  145  4.0000000000000006e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  41.2 
 
 
267 aa  145  5e-34  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  41.2 
 
 
267 aa  145  5e-34  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  38.63 
 
 
262 aa  145  7.0000000000000006e-34  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  40 
 
 
267 aa  145  9e-34  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  39.69 
 
 
287 aa  142  5e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  37.5 
 
 
267 aa  142  6e-33  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  42.69 
 
 
271 aa  141  8e-33  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  35.63 
 
 
273 aa  140  1.9999999999999998e-32  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  32.66 
 
 
265 aa  140  1.9999999999999998e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  38.94 
 
 
267 aa  139  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  32.66 
 
 
265 aa  138  7e-32  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  45.5 
 
 
259 aa  138  8.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  38.39 
 
 
264 aa  138  1e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  35.74 
 
 
261 aa  137  2e-31  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  37.8 
 
 
267 aa  137  2e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  42.02 
 
 
283 aa  136  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  36.43 
 
 
266 aa  136  3.0000000000000003e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.26 
 
 
266 aa  135  8e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  37.07 
 
 
260 aa  135  9e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  36.91 
 
 
262 aa  135  9e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  40.82 
 
 
275 aa  134  9.999999999999999e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  38.28 
 
 
261 aa  134  9.999999999999999e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  38.52 
 
 
259 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  40.09 
 
 
262 aa  133  1.9999999999999998e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  36.84 
 
 
261 aa  134  1.9999999999999998e-30  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  40.09 
 
 
262 aa  133  1.9999999999999998e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  39.29 
 
 
265 aa  134  1.9999999999999998e-30  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  44.97 
 
 
269 aa  134  1.9999999999999998e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  40.09 
 
 
262 aa  134  1.9999999999999998e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  38.43 
 
 
253 aa  133  3e-30  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.89 
 
 
261 aa  133  3e-30  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  36.56 
 
 
269 aa  133  3e-30  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  40 
 
 
270 aa  132  5e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  40 
 
 
258 aa  132  6e-30  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  43.01 
 
 
259 aa  132  6.999999999999999e-30  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  37.5 
 
 
259 aa  132  6.999999999999999e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  37.4 
 
 
259 aa  132  6.999999999999999e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  36.48 
 
 
271 aa  131  9e-30  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  39.34 
 
 
275 aa  131  1.0000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  39.43 
 
 
262 aa  131  1.0000000000000001e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  35.57 
 
 
258 aa  130  2.0000000000000002e-29  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  35.81 
 
 
260 aa  130  2.0000000000000002e-29  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  36.61 
 
 
265 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  37.74 
 
 
266 aa  130  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  38.86 
 
 
262 aa  130  3e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  39.91 
 
 
262 aa  130  3e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  36.4 
 
 
260 aa  129  4.0000000000000003e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  36.44 
 
 
265 aa  129  5.0000000000000004e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  36.16 
 
 
270 aa  129  6e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  37.67 
 
 
262 aa  128  7.000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  37.34 
 
 
262 aa  128  8.000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  43.24 
 
 
266 aa  128  8.000000000000001e-29  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  35.84 
 
 
287 aa  128  9.000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  37.1 
 
 
268 aa  128  9.000000000000001e-29  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  43.3 
 
 
258 aa  128  1.0000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  35.27 
 
 
266 aa  128  1.0000000000000001e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  39.39 
 
 
267 aa  127  1.0000000000000001e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  36.21 
 
 
264 aa  127  2.0000000000000002e-28  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  34.82 
 
 
266 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  34.65 
 
 
263 aa  127  2.0000000000000002e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  34.38 
 
 
266 aa  127  3e-28  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  34.82 
 
 
281 aa  127  3e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  36.68 
 
 
271 aa  126  3e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  35.6 
 
 
267 aa  126  3e-28  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  34.82 
 
 
281 aa  127  3e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  36.64 
 
 
262 aa  126  4.0000000000000003e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
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